Evidence map›Paper›PMID 30656243›Full record

ArticlePathogens & immunity2018

Incomplete Suppression of HIV-1 by SAMHD1 Permits Efficient Macrophage Infection.

Timothy Plitnik, Mark E Sharkey, Bijan Mahboubi, Baek Kim, Mario Stevenson

Open access · diamondAbstract read
In one paragraph

Article in Pathogens & immunity, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
0.5field-weighted citation impact, top 39% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 7 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 2 institutions in 2 countries.

Timothy PlitnikDepartment of Microbiology & Immunology; Miller School of Medicine, University of Miami; Miami, Florida.
Mark E SharkeyDepartment of Medicine; Miller School of Medicine, University of Miami; Miami, Florida.
Bijan MahboubiDepartment of Pediatrics, Emory University; Atlanta, Georgia.
Baek KimDepartment of Pediatrics, Emory University; Atlanta, Georgia.
Mario StevensonDepartment of Microbiology & Immunology; Miller School of Medicine, University of Miami; Miami, Florida.
University of Miami · USEmory University · US

Funding

University of Miami Developmental Center for AIDS Research (D-CFAR)P30AI073961 · NIAID · UNIVERSITY OF MIAMI SCHOOL OF MEDICINE · PI ALLAN E RODRIGUEZ · 2007 to 2026
$33.8M
UC Davis Biostatistics CoreP01AI131568 · NIAID · UNIVERSITY OF CALIFORNIA AT DAVIS · PI HARTIGAN-O'CONNOR, DENNIS J. · 2017 to 2021
$7.1M
Vif Antagonism: Lead Discovery and SAR - Project 1P01MH100942 · NIMH · UNIVERSITY OF MIAMI SCHOOL OF MEDICINE · PI VON GEGERFELT, AGNETA · 2013 to 2017
$6.0M
Revealing HIV-1 persistence in myeloid cell reservoirsR01MH116701 · NIMH · UNIVERSITY OF MIAMI SCHOOL OF MEDICINE · PI Mario Stevenson · 2018 to 2026
$4.0M
Lentivirus Replication Strategy and PathogenesisR01AI136581 · NIAID · EMORY UNIVERSITY · PI Baek Kim · 2018 to 2026
$3.9M
SAMHD1 controls dNTP pool and HIV sensitivity to NRTIsR01GM104198 · NIGMS · UNIVERSITY OF ROCHESTER · PI KIM, BAEK · 2012 to 2018
$2.3M
The role of myeloid cells in viral replication, persistence and neuroinvasionR01MH093306 · NIMH · UNIVERSITY OF MIAMI SCHOOL OF MEDICINE · PI STEVENSON, MARIO · 2011 to 2015
$1.8M
NIAID NIH HHS P01 AI131568NIAID NIH HHS P30 AI073961NIAID NIH HHS R01 AI136581NIGMS NIH HHS R01 GM104198NIMH NIH HHS P01 MH100942NIMH NIH HHS R01 MH093306NIMH NIH HHS R01 MH116701
6 · The paper itself

Abstract

backgroundSterile alpha motif and histidine/aspartic acid domain-containing protein (SAMHD1) is a dNTP triphosphorylase that reduces cellular dNTP levels in non-dividing cells, such as macrophages. Since dNTPs are required for reverse transcription, HIV-2 and most SIVs encode a Vpx protein that promotes proteasomal degradation of SAMHD1. It is unclear how HIV-1, which does not appear to harbor a SAMHD1 escape mechanism, is able to infect macrophages in the face of SAMHD1 restriction.

methodsTo assess whether HIV-1 had a mechanism to negate SAMHD1 activity, we compared SAMHD1 and dNTP levels in macrophages infected by HIV-1 and SIV. We examined whether macrophages infected by HIV-1 still harbored antiviral levels of SAMHD1 by assessing their susceptibility to superinfection by

resultsHere, we demonstrate that HIV-1 efficiently infects macrophages without modulating SAMHD1 activity or cellular dNTP levels, and that macrophages permissive to HIV-1 infection remained refractory to superinfection by

conclusionsOur study reveals fundamental differences between HIV-1 and SIV in the strategy used to evade restriction by SAMHD1 and suggests a degree of resistance of HIV-1 to the antiviral environment created by SAMHD1. Understanding how these cellular restrictions antagonize viral replication will be important for the design of novel antiviral strategies.

Indexed as

HIV-1macrophagesSAMHD1

Identifiers

PMID30656243
PMCPMC6333473
OpenAlexW2905175167

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.