Evidence map›Paper›PMID 30655599›Full record

ArticleScientific reports2019

The clock components Period2, Cryptochrome1a, and Cryptochrome2a function in establishing light-dependent behavioral rhythms and/or total activity levels in zebrafish.

Jun Hirayama, Yikelamu Alifu, Rin Hamabe, Sho Yamaguchi, Jun Tomita, Yusuke Maruyama, Yoichi Asaoka, Ken-Ichi Nakahama, Teruya Tamaru, Ken Takamatsu and 7 more

Abstract read
In one paragraph

Article in Scientific reports, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed.

  1. Article
  2. Frontiers in pharmacology · 2023
    Article
  3. Clock genes rescue nphp mutations in zebrafish.Human molecular genetics · 2022
    Article
  4. Article
  5. Article
  6. Article
  7. Article
  8. MKK7 deficiency in mature neurons impairs parental behavior in mice.Genes to cells : devoted to molecular & cellular mechanisms · 2021
    Article
  9. Metabolic implications of circadian disruption.Pflugers Archiv : European journal of physiology · 2020
    Review
  10. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

17 authors.

Jun HirayamaDepartment of Developmental and Regenerative Biology, Medical Research Institute, Tokyo Medical and Dental University (TMDU), Tokyo, Japan. jun.hirayama@komatsu-u.ac.jp.
Yikelamu AlifuDepartment of Developmental and Regenerative Biology, Medical Research Institute, Tokyo Medical and Dental University (TMDU), Tokyo, Japan.
Rin HamabeDepartment of Developmental and Regenerative Biology, Medical Research Institute, Tokyo Medical and Dental University (TMDU), Tokyo, Japan.
Sho YamaguchiDepartment of Neuropharmacology, Graduate School of Pharmaceutical Sciences, Nagoya City University, Nagoya, Japan.
Jun TomitaDepartment of Neuropharmacology, Graduate School of Pharmaceutical Sciences, Nagoya City University, Nagoya, Japan.
Yusuke MaruyamaDepartment of Biology, College of Liberal Arts and Sciences, Tokyo Medical and Dental University (TMDU), Ichikawa, Japan.
Yoichi AsaokaDepartment of Microbiology and Immunology, Yamaguchi University Graduate School of Medicine, Ube, Japan.
Ken-Ichi NakahamaDepartment of Cellular Physiological Chemistry, Tokyo Medical and Dental University (TMDU), Tokyo, Japan.
Teruya TamaruDepartment of Physiology and Advanced Research Center for Medical Science, Toho University School of Medicine, Tokyo, Japan.
Ken TakamatsuDepartment of Physiology and Advanced Research Center for Medical Science, Toho University School of Medicine, Tokyo, Japan.
Nobuhiko TakamatsuDepartment of Biosciences, School of Science, Kitasato University, Sagamihara, Japan.
Atsuhiko HattoriDepartment of Biology, College of Liberal Arts and Sciences, Tokyo Medical and Dental University (TMDU), Ichikawa, Japan.
Sachiko NishinaDepartment of Ophthalmology and Laboratory for Visual Science, National Center for Child Health and Development, Tokyo, Japan.
Noriyuki AzumaDepartment of Ophthalmology and Laboratory for Visual Science, National Center for Child Health and Development, Tokyo, Japan.
Atsuo KawaharaLaboratory for Developmental Biology, Center for Medical Education and Sciences, Graduate School of Medical Science, University of Yamanashi, Yamanashi, Japan.
Kazuhiko KumeDepartment of Neuropharmacology, Graduate School of Pharmaceutical Sciences, Nagoya City University, Nagoya, Japan. kume@phar.nagoya-cu.ac.jp.ORCID 0000-0003-4232-1657
Hiroshi NishinaDepartment of Developmental and Regenerative Biology, Medical Research Institute, Tokyo Medical and Dental University (TMDU), Tokyo, Japan. nishina.dbio@mri.tmd.ac.jp.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The circadian clock generates behavioral rhythms to maximize an organism's physiological efficiency. Light induces the formation of these rhythms by synchronizing cellular clocks. In zebrafish, the circadian clock components Period2 (zPER2) and Cryptochrome1a (zCRY1a) are light-inducible, however their physiological functions are unclear. Here, we investigated the roles of zPER2 and zCRY1a in regulating locomotor activity and behavioral rhythms. zPer2/zCry1a double knockout (DKO) zebrafish displayed defects in total locomotor activity and in forming behavioral rhythms when briefly exposed to light for 3-h. Exposing DKO zebrafish to 12-h light improved behavioral rhythm formation, but not total activity. Our data suggest that the light-inducible circadian clock regulator zCRY2a supports rhythmicity in DKO animals exposed to 12-h light. Single cell imaging analysis revealed that zPER2, zCRY1a, and zCRY2a function in synchronizing cellular clocks. Furthermore, microarray analysis of DKO zebrafish showed aberrant expression of genes involved regulating cellular metabolism, including ATP production. Overall, our results suggest that zPER2, zCRY1a and zCRY2a help to synchronize cellular clocks in a light-dependent manner, thus contributing to behavioral rhythm formation in zebrafish. Further, zPER2 and zCRY1a regulate total physical activity, likely via regulating cellular energy metabolism. Therefore, these circadian clock components regulate the rhythmicity and amount of locomotor behavior.

Indexed as

AnimalsCircadian ClocksCLOCK ProteinsCryptochromesLightLocomotionPeriod Circadian ProteinsSingle-Cell AnalysisZebrafishZebrafish ProteinsCLOCK Proteinscry1a protein, zebrafishCryptochromesPeriod Circadian ProteinsZebrafish Proteins

Identifiers

PMID30655599
PMCPMC6336812

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.