Evidence map›Paper›PMID 30655520›Full record

ArticleNature communications2019

TCR microclusters form spatially segregated domains and sequentially assemble in calcium-dependent kinetic steps.

Jason Yi, Lakshmi Balagopalan, Tiffany Nguyen, Katherine M McIntire, Lawrence E Samelson

Abstract read
In one paragraph

Article in Nature communications, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 58 papers.

0numbers the graph read from it
0cells of the map it votes in
58citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

58 citing papers in PubMed.

  1. LAT condensation gates PLCγ1 activation via bimodal LAT phosphorylation.Proceedings of the National Academy of Sciences of the United States of America · 2026
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  10. Proofreading and single-molecule sensitivity in T cell receptor signaling by condensate nucleation.Proceedings of the National Academy of Sciences of the United States of America · 2025
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Jason YiLaboratory of Cellular and Molecular Biology, Center for Cancer Research, National Institutes of Health, Bethesda, MD, 20892, USA.
Lakshmi BalagopalanLaboratory of Cellular and Molecular Biology, Center for Cancer Research, National Institutes of Health, Bethesda, MD, 20892, USA. balagopl@mail.nih.gov.
Tiffany NguyenLaboratory of Cellular and Molecular Biology, Center for Cancer Research, National Institutes of Health, Bethesda, MD, 20892, USA.
Katherine M McIntireLaboratory of Cellular and Molecular Biology, Center for Cancer Research, National Institutes of Health, Bethesda, MD, 20892, USA.
Lawrence E SamelsonLaboratory of Cellular and Molecular Biology, Center for Cancer Research, National Institutes of Health, Bethesda, MD, 20892, USA. samelsonl@mail.nih.gov.

Funding

Biochemical Basis of T Cell ActivationZIABC010304 · NCI · DIVISION OF BASIC SCIENCES - NCI · PI SAMELSON, LAWRENCE · 2009 to 2025
$36.3M
6 · The paper itself

Abstract

Engagement of the T cell receptor (TCR) by stimulatory ligand results in the rapid formation of microclusters at sites of T cell activation. Whereas microclusters have been studied extensively using confocal microscopy, the spatial and kinetic relationships of their signaling components have not been well characterized due to limits in image resolution and acquisition speed. Here we show, using TIRF-SIM to examine the organization of microclusters at sub-diffraction resolution, the presence of two spatially distinct domains composed of ZAP70-bound TCR and LAT-associated signaling complex. Kinetic analysis of microcluster assembly reveal surprising delays between the stepwise recruitment of ZAP70 and signaling proteins to the TCR, as well as distinct patterns in their disassociation. These delays are regulated by intracellular calcium flux downstream of T cell activation. Our results reveal novel insights into the spatial and kinetic regulation of TCR microcluster formation and T cell activation.

Indexed as

Adaptor Proteins, Signal TransducingCalciumFeedback, PhysiologicalGene Knockout TechniquesHumansImage Processing, Computer-AssistedIntravital MicroscopyJurkat CellsKineticsLeukocytes, MononuclearLymphocyte ActivationMembrane ProteinsMicroscopy, FluorescencePrimary Cell CultureProtein DomainsReceptors, Antigen, T-CellAdaptor Proteins, Signal TransducingCalciumLAT protein, humanMembrane ProteinsReceptors, Antigen, T-CellZAP70 protein, humanZAP-70 Protein-Tyrosine Kinase

Identifiers

PMID30655520
PMCPMC6336795

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.