Evidence map›Paper›PMID 30655338›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2019

Real-time 2-5A kinetics suggest that interferons β and λ evade global arrest of translation by RNase L.

Alisha Chitrakar, Sneha Rath, Jesse Donovan, Kaitlin Demarest, Yize Li, Raghavendra Rao Sridhar, Susan R Weiss, Sergei V Kotenko, Ned S Wingreen, Alexei Korennykh

Open access · bronzeAbstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 36 papers.

0numbers the graph read from it
0cells of the map it votes in
36citing papers in PubMed
2.4field-weighted citation impact, top 11% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

36 citing papers in PubMed, 48 citations in OpenAlex.

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  12. A CRISPR-Cas9 knockout screening identifies IRF2 as a key driver of OAS3/RNase L-mediated RNA decay during viral infection.Proceedings of the National Academy of Sciences of the United States of America · 2024
    Article
  13. Functional Analysis of Oligoadenylate Synthetase in the Emu (Animals : an open access journal from MDPI · 2024
    Article
  14. Article
  15. The Many Faces of Oligoadenylate Synthetases.Journal of interferon & cytokine research : the official journal of the International Society for Interferon and Cytokine Research · 2023
    Review
  16. Review
  17. Introns encode dsRNAs undetected by RIG-I/MDA5/interferons and sensed via RNase L.Proceedings of the National Academy of Sciences of the United States of America · 2021
    Article
  18. Immunogenicity ofAccounts of chemical research · 2021
    Review
  19. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 3 institutions in 1 country.

Alisha ChitrakarDepartment of Molecular Biology, Princeton University, Princeton, NJ 08544.
Sneha RathDepartment of Molecular Biology, Princeton University, Princeton, NJ 08544.
Jesse DonovanDepartment of Molecular Biology, Princeton University, Princeton, NJ 08544.
Kaitlin DemarestDepartment of Molecular Biology, Princeton University, Princeton, NJ 08544.
Yize LiDepartment of Microbiology, Perelman School of Medicine, University of Pennsylvania, Philadelphia, PA 19104.ORCID 0000-0003-1721-741X
Raghavendra Rao SridharDepartment of Microbiology, Biochemistry, and Molecular Genetics, Rutgers New Jersey Medical School, Newark, NJ 07103.
Susan R WeissDepartment of Microbiology, Perelman School of Medicine, University of Pennsylvania, Philadelphia, PA 19104.
Sergei V KotenkoDepartment of Microbiology, Biochemistry, and Molecular Genetics, Rutgers New Jersey Medical School, Newark, NJ 07103.
Ned S WingreenDepartment of Molecular Biology, Princeton University, Princeton, NJ 08544.
Alexei KorennykhDepartment of Molecular Biology, Princeton University, Princeton, NJ 08544; akorenny@princeton.edu.
Princeton University · USRutgers, The State University of New Jersey · USUniversity of Pennsylvania · US

Funding

PREDOCTORAL TRAINING PROGRAM IN GENETICST32GM007388 · NIGMS · PRINCETON UNIVERSITY · PI CRISTEA, ILEANA M. · 1985 to 2022
$27.4M
Control of Viral Pathogenesis by Regulation of 2-5A LevelsR01AI104887 · NIAID · UNIVERSITY OF PENNSYLVANIA · PI SILVERMAN, ROBERT H., WEISS, SUSAN R · 2013 to 2023
$7.6M
Development of IFN-lambda3 for the Prevention and Treatment of Virus InfectionR01AI104669 · NIAID · UNIV OF MED/DENT OF NJ-NJ MEDICAL SCHOOL · PI DURBIN, JOAN E., KOTENKO, SERGEI V · 2013 to 2017
$5.9M
Structure and Function of Kinase Family Receptors Regulating TranslationR01GM110161 · NIGMS · PRINCETON UNIVERSITY · PI KORENNYKH, ALEXEI · 2014 to 2022
$2.5M
Murine coronavirus neurovirulence: role of type I interferon responseR01NS081008 · NINDS · UNIVERSITY OF PENNSYLVANIA · PI WEISS, SUSAN R · 2012 to 2016
$1.7M
Beyond infection: Innate immune receptors as an emerging brake on metastasisF99CA212468 · NCI · PRINCETON UNIVERSITY · PI RATH, SNEHA PRAKASH · 2016 to 2017
$89k
NCI NIH HHS F99 CA212468NIAID NIH HHS R01 AI104669NIAID NIH HHS R01 AI104887NIGMS NIH HHS R01 GM110161NIGMS NIH HHS T32 GM007388NINDS NIH HHS R01 NS081008
6 · The paper itself

Abstract

Cells of all mammals recognize double-stranded RNA (dsRNA) as a foreign material. In response, they release interferons (IFNs) and activate a ubiquitously expressed pseudokinase/endoribonuclease RNase L. RNase L executes regulated RNA decay and halts global translation. Here, we developed a biosensor for 2',5'-oligoadenylate (2-5A), the natural activator of RNase L. Using this biosensor, we found that 2-5A was acutely synthesized by cells in response to dsRNA sensing, which immediately triggered cellular RNA cleavage by RNase L and arrested host protein synthesis. However, translation-arrested cells still transcribed IFN-stimulated genes and secreted IFNs of types I and III (IFN-β and IFN-λ). Our data suggest that IFNs escape from the action of RNase L on translation. We propose that the 2-5A/RNase L pathway serves to rapidly and accurately suppress basal protein synthesis, preserving privileged production of defense proteins of the innate immune system.

Indexed as

Biosensing TechniquesProtein BiosynthesisCell LineEndoribonucleasesHumansInterferon-betaInterferon LambdaInterferonsInterleukinsModels, MolecularProtein BindingProtein ConformationProtein Interaction Domains and MotifsStructure-Activity Relationship2-5A-dependent ribonucleaseEndoribonucleasesInterferon-betaInterferon Lambdainterferon-lambda, humanInterferonsInterleukins2-5AinterferonRNA decayRNase Ltranslation reprogramming

Identifiers

PMID30655338
PMCPMC6369740
OpenAlexW2901492711

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.