Evidence map›Paper›PMID 30654737›Full record

ArticleBMC evolutionary biology2019

Origin and diversification of the plasminogen activation system among chordates.

Andrés Chana-Muñoz, Agnieszka Jendroszek, Malene Sønnichsen, Tobias Wang, Michael Ploug, Jan K Jensen, Peter A Andreasen, Christian Bendixen, Frank Panitz

Open access · goldAbstract read
In one paragraph

Article in BMC evolutionary biology, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 26 papers.

0numbers the graph read from it
0cells of the map it votes in
26citing papers in PubMed
2.4field-weighted citation impact, top 11% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

26 citing papers in PubMed, 49 citations in OpenAlex.

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  10. Evolutionary Insight into Immunothrombosis as a Healing Mechanism.International journal of molecular sciences · 2022
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  15. Fibrinolysis: A Primordial System Linked to the Immune Response.International journal of molecular sciences · 2021
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 2 institutions in 1 country.

Andrés Chana-MuñozDepartment of Molecular Biology and Genetics, Aarhus University, 8830, Tjele, Denmark.
Agnieszka JendroszekDepartment of Molecular Biology and Genetics, Aarhus University, 8000, Aarhus, Denmark.
Malene SønnichsenDepartment of Molecular Biology and Genetics, Aarhus University, 8000, Aarhus, Denmark.
Tobias WangInstitute for Bioscience Zoophysiology, Aarhus University, 8000, Aarhus, Denmark.
Michael PlougFinsen Laboratory, Rigshospitalet, DK-2200 Copenhagen N, Denmark and Biotech Research and Innovation Centre (BRIC), University of Copenhagen, DK-2200, Copenhagen, Denmark.
Jan K JensenDepartment of Molecular Biology and Genetics, Aarhus University, 8000, Aarhus, Denmark.
Peter A AndreasenDepartment of Molecular Biology and Genetics, Aarhus University, 8000, Aarhus, Denmark.
Christian BendixenDepartment of Molecular Biology and Genetics, Aarhus University, 8830, Tjele, Denmark.
Frank PanitzDepartment of Molecular Biology and Genetics, Aarhus University, 8830, Tjele, Denmark. frank.panitz@mbg.au.dk.ORCID 0000-0002-6909-5162
Aarhus University · DKUniversity of Copenhagen · DK

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundThe plasminogen (PLG) activation system is composed by a series of serine proteases, inhibitors and several binding proteins, which together control the temporal and spatial generation of the active serine protease plasmin. As this proteolytic system plays a central role in human physiology and pathophysiology it has been extensively studied in mammals. The serine proteases of this system are believed to originate from an ancestral gene by gene duplications followed by domain gains and deletions. However, the identification of ancestral forms in primitive chordates supporting these theories remains elusive. In addition, evolutionary studies of the non-proteolytic members of this system are scarce.

resultsOur phylogenetic analyses place lamprey PLG at the root of the vertebrate PLG-group, while lamprey PLG-related growth factors represent the ancestral forms of the jawed-vertebrate orthologues. Furthermore, we find that the earliest putative orthologue of the PLG activator group is the hyaluronan binding protein 2 (HABP2) gene found in lampreys. The prime plasminogen activators (tissue- and urokinase-type plasminogen activator, tPA and uPA) first occur in cartilaginous fish and phylogenetic analyses confirm that all orthologues identified compose monophyletic groups to their mammalian counterparts. Cartilaginous fishes exhibit the most ancient vitronectin of all vertebrates, while plasminogen activator inhibitor 1 (PAI-1) appears for the first time in cartilaginous fishes and is conserved in the rest of jawed vertebrate clades. PAI-2 appears for the first time in the common ancestor of reptiles and mammals, and represents the latest appearing plasminogen activator inhibitor. Finally, we noted that the urokinase-type plasminogen activator receptor (uPAR)-and three-LU domain containing genes in general-occurred later in evolution and was first detectable after coelacanths.

conclusionsThis study identifies several primitive orthologues of the mammalian plasminogen activation system. These ancestral forms provide clues to the origin and diversification of this enzyme system. Further, the discovery of several members-hitherto unknown in mammals-provide new perspectives on the evolution of this important enzyme system.

Indexed as

Genetic VariationPhylogenyAmino Acid SequenceAnimalsChordataDatabases, ProteinHumansLikelihood FunctionsPlasminogenPlasminogen Activator Inhibitor 1Protein DomainsSequence Analysis, RNATranscriptomeUrokinase-Type Plasminogen ActivatorVitronectinPlasminogenPlasminogen Activator Inhibitor 1Urokinase-Type Plasminogen ActivatorVitronectinChordatesEvolutionPhylogenetic analysisPlasminogenPlasminogen activation systemTranscriptome analysis

Identifiers

PMID30654737
PMCPMC6337849
OpenAlexW2912616016

What OpenQuestion holds

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LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.