Evidence map›Paper›PMID 30653556›Full record

ArticlePloS one2019

Effects of skeletal unloading on the antibody repertoire of tetanus toxoid and/or CpG treated C57BL/6J mice.

Trisha A Rettig, Bailey A Bye, Nina C Nishiyama, Savannah Hlavacek, Claire Ward, Michael J Pecaut, Stephen K Chapes

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
2.0field-weighted citation impact, top 14% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 24 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 1 country.

Trisha A RettigDivision of Biology, Kansas State University, Manhattan, Kansas, United States of America.ORCID 0000-0001-7434-9182
Bailey A ByeDivision of Biology, Kansas State University, Manhattan, Kansas, United States of America.
Nina C NishiyamaDivision of Biomedical Engineering Sciences, Loma Linda University, Loma Linda, California, United States of America.
Savannah HlavacekDivision of Biology, Kansas State University, Manhattan, Kansas, United States of America.
Claire WardDivision of Biology, Kansas State University, Manhattan, Kansas, United States of America.
Michael J PecautDivision of Biomedical Engineering Sciences, Loma Linda University, Loma Linda, California, United States of America.
Stephen K ChapesDivision of Biology, Kansas State University, Manhattan, Kansas, United States of America.ORCID 0000-0003-2833-3096
Kansas State University · USLoma Linda University · US

Funding

Mentoring CoreP20GM103418 · NIGMS · UNIVERSITY OF KANSAS MEDICAL CENTER · PI Douglas E Wright · 2012 to 2026
$63.0M
UNDERSTANDING THE ROLE OF SMALL RNAS IN ARABIDOPSIS POLLEN DEVELOPMENTP20RR016475 · NCRR · UNIVERSITY OF KANSAS MEDICAL CENTER · PI LUSHINGTON, GERALD H · 2001 to 2011
$38.1M
NCRR NIH HHS P20 RR016475NIGMS NIH HHS P20 GM103418
6 · The paper itself

Abstract

Spaceflight affects the immune system, but the effects on the antibody repertoire, responsible for humoral immunity, has not been well explored. In particular, the complex gene assembly and expression process; including mutations, might make this process vulnerable. Complementarity determining region 3 (CDR3), composed of parts of the V-(D-)J-gene segments, is very important for antigen binding and can be used as an important measure of variability. Skeletal unloading, and the physiological effects of it, parallel many impacts of space flight. Therefore, we explored the impact of skeletal unloading using the antiorthostatic suspension (AOS) model. Animals were experimentally challenged with tetanus toxoid (TT) and/or the adjuvant CpG. Blood was analyzed for anti-TT antibody and corticosterone concentrations. Whole spleen tissue was prepared for repertoire characterization. AOS animals showed higher levels of corticosterone levels, but AOS alone did not affect anti-TT serum antibody levels. Administration of CpG significantly increased the circulating anti-TT antibody concentrations. AOS did alter constant gene usage resulting in higher levels of IgM and lower levels of IgG. CpG also altered constant gene region usage increasing usage of IgA. Significant changes could be detected in multiple V-, D-, and J-gene segments in both the heavy and light chains in response to AOS, TT, and CpG treatments. Analysis of class-switched only transcripts revealed a different pattern of V-gene segment usage than detected in the whole repertoire and also showed significant alterations in gene segment usage after challenge. Alterations in V/J pairing were also detected in response to challenge. CDR3 amino acid sequence overlaps were similar among treatment groups, though the addition of CpG lowered overlap in the heavy chain. We isolated 3,045 whole repertoire and 98 potentially TT-specific CDR3 sequences for the heavy chain and 569 for the light chain. Our results demonstrate that AOS alters the repertoire response to challenge with TT and/or CpG.

Indexed as

Space FlightAdjuvants, ImmunologicAnimalsComplementarity Determining RegionsCorticosteroneCpG IslandsFemaleHindlimb SuspensionImmunity, HumoralImmunoglobulin GImmunoglobulin Heavy ChainsImmunoglobulin Light ChainsImmunologic MemoryMiceMice, Inbred C57BLTetanus ToxoidAdjuvants, ImmunologicComplementarity Determining RegionsCorticosteroneImmunoglobulin GImmunoglobulin Heavy ChainsImmunoglobulin Light ChainsTetanus Toxoid

Identifiers

PMID30653556
PMCPMC6336310
OpenAlexW2911203605

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.