Evidence map›Paper›PMID 30652127›Full record

ArticleCommunications biology2019

Optogenetic control of integrin-matrix interaction.

Julia Baaske, Wignand W D Mühlhäuser, O Sascha Yousefi, Sebastian Zanner, Gerald Radziwill, Maximilian Hörner, Wolfgang W A Schamel, Wilfried Weber

Open access · goldAbstract read
In one paragraph

Article in Communications biology, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 25 papers.

0numbers the graph read from it
0cells of the map it votes in
25citing papers in PubMed
7.8field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

25 citing papers in PubMed, 38 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Article
  6. Review
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  8. Review
  9. The Art of Engineering Biomimetic Cellular Microenvironments.ACS biomaterials science & engineering · 2021
    Article
  10. Review
  11. Review
  12. Review
  13. Review
  14. Synthetic Biology-Empowered Hydrogels for Medical Diagnostics.Advances in biochemical engineering/biotechnology · 2021
    Article
  15. Physical Cues of Matrices Reeducate Nerve Cells.Frontiers in cell and developmental biology · 2021
    Review
  16. Review
  17. Red Light Optogenetics in Neuroscience.Frontiers in cellular neuroscience · 2021
    Review
  18. Article
  19. Review
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 1 institution in 1 country.

Julia Baaske1Faculty of Biology, University of Freiburg, Schänzlestr. 1, 79104 Freiburg, Germany.
Wignand W D Mühlhäuser1Faculty of Biology, University of Freiburg, Schänzlestr. 1, 79104 Freiburg, Germany.
O Sascha Yousefi1Faculty of Biology, University of Freiburg, Schänzlestr. 1, 79104 Freiburg, Germany.ORCID 0000-0001-5304-729X
Sebastian Zanner1Faculty of Biology, University of Freiburg, Schänzlestr. 1, 79104 Freiburg, Germany.
Gerald Radziwill1Faculty of Biology, University of Freiburg, Schänzlestr. 1, 79104 Freiburg, Germany.
Maximilian Hörner1Faculty of Biology, University of Freiburg, Schänzlestr. 1, 79104 Freiburg, Germany.
Wolfgang W A Schamel1Faculty of Biology, University of Freiburg, Schänzlestr. 1, 79104 Freiburg, Germany.
Wilfried Weber1Faculty of Biology, University of Freiburg, Schänzlestr. 1, 79104 Freiburg, Germany.
University of Freiburg · DE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Optogenetic approaches have gathered momentum in precisely modulating and interrogating cellular signalling and gene expression. The use of optogenetics on the outer cell surface to interrogate how cells receive stimuli from their environment, however, has so far not reached its full potential. Here we demonstrate the development of an optogenetically regulated membrane receptor-ligand pair exemplified by the optically responsive interaction of an integrin receptor with the extracellular matrix. The system is based on an integrin engineered with a phytochrome-interacting factor domain (OptoIntegrin) and a red light-switchable phytochrome B-functionalized matrix (OptoMatrix). This optogenetic receptor-ligand pair enables light-inducible and -reversible cell-matrix interaction, as well as the controlled activation of downstream mechanosensory signalling pathways. Pioneering the application of optogenetic switches in the extracellular environment of cells, this OptoMatrix-OptoIntegrin system may serve as a blueprint for rendering matrix-receptor interactions amendable to precise control with light.

Indexed as

ArabidopsisArabidopsis ProteinsBasic Helix-Loop-Helix ProteinsExtracellular MatrixHEK293 CellsHeLa CellsHumansIntegrin alphaVbeta3LightMCF-7 CellsOptogeneticsPhytochrome BPlasmidsProtein ConformationSignal TransductionTransfectionArabidopsis ProteinsBasic Helix-Loop-Helix ProteinsIntegrin alphaVbeta3PHYB protein, ArabidopsisPhytochrome BPIF6 protein, Arabidopsis

Identifiers

PMID30652127
PMCPMC6325061
OpenAlexW2908915132

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.