Evidence map›Paper›PMID 30650532›Full record

ArticleMetabolites2019

Univariate Statistical Analysis as a Guide to ¹H-NMR Spectra Signal Assignment by Visual Inspection.

Chenglin Zhu, Beatrice Vitali, Gilbert Donders, Carola Parolin, Yan Li, Luca Laghi

Abstract read
In one paragraph

Article in Metabolites, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. Automatic 1DMetabolites · 2021
    Review
  5. Article
  6. Article
  7. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Chenglin ZhuDepartment of Agri-Food Science and Technology, University of Bologna, 40126 Bologna, Italy. chenglin.zhu2@unibo.it.ORCID 0000-0003-3486-1936
Beatrice VitaliDepartment of Pharmacy and Biotechnology, University of Bologna, 40126 Bologna, Italy. b.vitali@unibo.it.ORCID 0000-0001-6196-5410
Gilbert DondersDepartment of Obstetrics and Gynaecology, General Hospital Heilig Hart, 3000 Tienen, Belgium. gilbert.donders@femicare.net.ORCID 0000-0001-9890-6254
Carola ParolinDepartment of Pharmacy and Biotechnology, University of Bologna, 40126 Bologna, Italy. carola.parolin@unibo.it.
Yan LiDepartment of Agri-Food Science and Technology, University of Bologna, 40126 Bologna, Italy. yan.li7@unibo.it.
Luca LaghiDepartment of Agri-Food Science and Technology, University of Bologna, 40126 Bologna, Italy. l.laghi@unibo.it.ORCID 0000-0003-1593-7376

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

In Proton Nuclear Magnetic Resonance (¹H-NMR) spectroscopy, the signals assignment procedure is normally conducted by visual inspection of the spectra, by taking advantage of the innate predisposition of human eye for pattern recognition. In the case of untargeted metabolomics investigations on food and body fluids, the complexity of the spectra may lead the user to overlook signals, independently from their biological relevance. Here, we describe a four steps procedure that is designed to guide signals assignment task by visual inspection. The procedure can be employed whenever an experimental plan allows for the application of a univariate statistical analysis on a point-by-point basis, which is commonly the case. By comparing, as a proof of concept, ¹H-NMR spectra of vaginal fluids of healthy and bacterial vaginosis (BV) affected women, we show that the procedure is also readily usable by non-experts in three particularly challenging cases: overlapping multiplets, poorly aligned signals, and signals with very poor signal-to-noise ratio. The paper is accompanied by the necessary codes and examples written in R computational language to allow the interested user gaining a hands-on impression of the procedure's strengths and weaknesses.

Indexed as

1H-NMRmetabolomicssignals assignmentvisual inspection

Identifiers

PMID30650532
PMCPMC6359365

What OpenQuestion holds

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LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.