Evidence map›Paper›PMID 30650082›Full record

ArticlePloS one2019

Prevalence and persistence of transmitted drug resistance mutations in the German HIV-1 Seroconverter Study Cohort.

Patrycja Machnowska, Karolin Meixenberger, Daniel Schmidt, Heiko Jessen, Heribert Hillenbrand, Barbara Gunsenheimer-Bartmeyer, Osamah Hamouda, Claudia Kücherer, Norbert Bannert, German HIV-1 Seroconverter Study Group

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 19 papers.

0numbers the graph read from it
0cells of the map it votes in
19citing papers in PubMed
4.5field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

19 citing papers in PubMed, 50 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 1 institution in 1 country.

Patrycja MachnowskaDivision of HIV and Other Retroviruses, Robert Koch Institute, Berlin, Germany.ORCID 0000-0001-6139-9199
Karolin MeixenbergerDivision of HIV and Other Retroviruses, Robert Koch Institute, Berlin, Germany.
Daniel SchmidtDivision of HIV/AIDS, STI and Blood-borne Infections, Robert Koch Institute, Berlin, Germany.ORCID 0000-0001-8205-4755
Heiko JessenMedical Care Centre Jessen, Berlin, Germany.
Heribert HillenbrandMedical Care Centre City-Ost, Berlin, Germany.
Barbara Gunsenheimer-BartmeyerDivision of HIV/AIDS, STI and Blood-borne Infections, Robert Koch Institute, Berlin, Germany.
Osamah HamoudaDivision of HIV/AIDS, STI and Blood-borne Infections, Robert Koch Institute, Berlin, Germany.
Claudia KüchererDivision of HIV and Other Retroviruses, Robert Koch Institute, Berlin, Germany.
Norbert BannertDivision of HIV and Other Retroviruses, Robert Koch Institute, Berlin, Germany.
German HIV-1 Seroconverter Study Group
Robert Koch Institute · DE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The prevalence of transmitted drug resistance (TDR) in antiretroviral therapy (ART)-naïve individuals remains stable in most developed countries despite a decrease in the prevalence of acquired drug resistance. This suggests that persistence and further transmission of HIV-1 that encodes transmitted drug resistance mutations (TDRMs) is occurring in ART-naïve individuals. In this study, we analysed the prevalence and persistence of TDRMs in the protease and reverse transcriptase-sequences of ART-naïve patients within the German HIV-1 Seroconverter Study Cohort who were infected between 1996 and 2017. The prevalence of TDRMs and baseline susceptibility to antiretroviral drugs were assessed using the Stanford HIVdb list and algorithm. Mean survival times of TDRMs were calculated by Kaplan-Meier analysis. The overall prevalence of TDR was 17.2% (95% CI 15.7-18.6, N = 466/2715). Transmitted NNRTI resistance was observed most frequently with 7.8% (95% CI 6.8-8.8), followed by NRTI resistance (5.0%, 95% CI 4.2-5.9) and PI resistance (2.8%, 95% CI 2.2-3.4). Total TDR (OR = 0.89, p = 0.034) and transmitted NRTI resistance (OR = 0.65, p = 0.000) decreased between 1996 and 2017 but has remained stable during the last decade. Viral susceptibility to NNRTIs (6.5%-6.9% for individual drugs) was mainly reduced, while <3% of the recommended NRTIs and PIs were affected. The longest mean survival times were calculated for the NNRTI mutations K103N (5.3 years, 95% CI 4.2-5.6) and E138A/G/K (8.0 years, 95% CI 5.8-10.2 / 7.9 years, 95% CI 5.4-10.3 / 6.7 years, 95% CI 6.7-6.7) and for the NRTI mutation M41L (6.4 years, 95% CI 6.0-6.7).The long persistence of single TDRMs indicates that onward transmission from ART-naïve individuals is the main cause for TDR in Germany. Transmitted NNRTI resistance was the most frequent TDR, showing simultaneously the highest impact on baseline ART susceptibility and on TDRMs with prolonged persistence. These results give cause for concern regarding the use of NNRTI in first-line regimens.

Indexed as

AdultAnti-HIV AgentsAnti-Retroviral AgentsCohort StudiesDrug Resistance, ViralFemaleGermanyHIV-1HIV InfectionsHIV SeropositivityHumansKaplan-Meier EstimateMaleMiddle AgedMutationNucleosidesAnti-HIV AgentsAnti-Retroviral AgentsNucleosidesReverse Transcriptase Inhibitors

Identifiers

PMID30650082
PMCPMC6334938
OpenAlexW2909647557

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.