Evidence map›Paper›PMID 30649658›Full record

ArticleMolecular biology reports2019

Differential transcriptional responses of carotenoid biosynthesis genes in the marine green alga Tetraselmis suecica exposed to redox and non-redox active metals.

Ramaraj Sathasivam, Jang-Seu Ki

Abstract read
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In one paragraph

Article in Molecular biology reports, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
0.9field-weighted citation impact, top 29% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 27 citations in OpenAlex.

  1. Article
  2. Optimization of Extraction Conditions of Carotenoids fromMolecules (Basel, Switzerland) · 2022
    Article
  3. Article
  4. Article
  5. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors at 2 institutions in 2 countries.

Ramaraj SathasivamDepartment of Biotechnology, Sangmyung University, Seoul, 03016, South Korea.ORCID http://orcid.org/0000-0002-3516-9274
Jang-Seu KiDepartment of Biotechnology, Sangmyung University, Seoul, 03016, South Korea. kijs@smu.ac.kr.ORCID http://orcid.org/0000-0002-6007-9262
Sangmyung University · KRScripps Institution of Oceanography · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The green microalga, Tetraselmis suecica, is commonly used in scientific, industrial, and aquacultural purposes because of its high stress tolerance and ease of culture in wide spectrums of environments. We hypothesized that carotenoids help to protect Tetraselmis cells from environmental stress by regulating genes in biosynthetic pathways. Here, we determined three major carotenogenic genes, phytoene synthase (PSY), phytoene desaturase (PDS), and β-lycopene cyclase (LCY-B) in T. suecica, and examined the physiological parameters and gene expression responses when exposed to redox-active metals and non-redox-active metals. Phylogenetic analyses of each gene indicated that T. suecica clustered well with other green algae. Real-time PCR analysis showed that TsPSY, TsPDS, and TsLCY-B genes greatly responded to the redox-active metals in CuSO

Indexed as

Biosynthetic PathwaysCarotenoidsChlorophytaGene ExpressionGeranylgeranyl-Diphosphate GeranylgeranyltransferaseIntramolecular LyasesMetalsOxidation-ReductionOxidoreductasesPhotosynthesisPhylogenyCarotenoidsGeranylgeranyl-Diphosphate GeranylgeranyltransferaseIntramolecular Lyaseslycopene cyclase-isomeraseMetalsOxidoreductasesphytoene dehydrogenaseCarotenoidsGene expressionMarine green algaeNon-redox-active metalsRedox-active metalsTetraselmis suecica

Identifiers

PMID30649658
OpenAlexW2910959565

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.