Evidence map›Paper›PMID 30649532›Full record

Observational studyThe Journal of infectious diseases2019

DNA Methylation Markers of Type 2 Diabetes Mellitus Among Male Veterans With or Without Human Immunodeficiency Virus Infection.

Raina Mathur, Qin Hui, Yunfeng Huang, Marta Gwinn, Kaku So-Armah, Matthew S Freiberg, Amy C Justice, Ke Xu, Vincent C Marconi, Yan V Sun

Open access · bronzeAbstract readObservational Study
In one paragraph

Observational study in The Journal of infectious diseases, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 18 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
18citing papers in PubMed, 1 pooled it
1.7field-weighted citation impact, top 16% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

18 citing papers in PubMed, 1 synthesis or guideline pooled it, 30 citations in OpenAlex.

  1. Pooled it
  2. Review
  3. Epigenetic associations with kidney disease in individuals of African ancestry with APOL1 high-risk genotypes and HIV.Nephrology, dialysis, transplantation : official publication of the European Dialysis and Transplant Association - European Renal Association · 2025
    Article
  4. Article
  5. Article
  6. International journal of molecular sciences · 2024
    Article
  7. Article
  8. Epigenetic Age Acceleration Markers Are Associated With Physiologic Frailty and All-Cause Mortality in People With Human Immunodeficiency Virus.Clinical infectious diseases : an official publication of the Infectious Diseases Society of America · 2023
    Article
  9. BMJ open diabetes research & care · 2023
    Article
  10. Article
  11. Review
  12. Article
  13. DNA Methylation of TXNIP Independently Associated with Inflammation and Diabetes Mellitus in Twins.Twin research and human genetics : the official journal of the International Society for Twin Studies · 2021
    Article
  14. Article
  15. Article
  16. Epigenetic Associations With Estimated Glomerular Filtration Rate Among Men With Human Immunodeficiency Virus Infection.Clinical infectious diseases : an official publication of the Infectious Diseases Society of America · 2020
    Article
  17. Review
  18. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 3 institutions in 1 country.

Raina MathurDepartment of Epidemiology, Emory University Rollins School of Public Health, Atlanta.
Qin HuiDepartment of Epidemiology, Emory University Rollins School of Public Health, Atlanta.
Yunfeng HuangDepartment of Epidemiology, Emory University Rollins School of Public Health, Atlanta.
Marta GwinnDepartment of Epidemiology, Emory University Rollins School of Public Health, Atlanta.
Kaku So-ArmahDepartment Global Health, Emory University Rollins School of Public Health, Atlanta.
Matthew S FreibergDivision of Infectious Diseases, Emory University School of Medicine, Atlanta.
Amy C JusticeDepartment of Biomedical Informatics, Emory University School of Medicine, Atlanta.
Ke XuDepartment of Biomedical Informatics, Emory University School of Medicine, Atlanta.
Vincent C MarconiCardiovascular Medicine Division, Vanderbilt University School of Medicine and Tennessee Valley Healthcare System, Nashville.
Yan V SunDepartment of Epidemiology, Emory University Rollins School of Public Health, Atlanta.
Emory University · USNew Haven Public Schools · USVanderbilt University · US

Funding

Yale Clinical and Translational Science Award (U Component)UL1TR001863 · NCATS · YALE UNIVERSITY · PI John H. Krystal, LUCILA OHNO-MACHADO · 2016 to 2026
$102.9M
Virology and Molecular Biomarkers CoreP30AI050409 · NIAID · EMORY UNIVERSITY · PI Ann M Chahroudi, Colleen F Kelley · 2002 to 2026
$74.0M
SUBSTANCE ABUSEK12DA000167 · NIDA · YALE UNIVERSITY · PI STEPHANIE S O'MALLEY, Marc N Potenza · 1991 to 2026
$17.7M
Novel Mechanisms Driving Excess Atherosclerotic Cardiovascular Disease Risk in the Context of HIV: The Role of Liver InjuryK01HL134147 · NHLBI · BOSTON MEDICAL CENTER · PI SO-ARMAH, KAKU · 2016 to 2020
$620k
Genome-wide DNA methylation in HIV infected drug usersR03DA039745 · NIDA · YALE UNIVERSITY · PI XU, KE · 2015 to 2016
$260k
NCATS NIH HHS UL1 TR001863NHLBI NIH HHS K01 HL134147NIAID NIH HHS P30 AI050409NIDA NIH HHS K12 DA000167NIDA NIH HHS R03 DA039745
6 · The paper itself

Abstract

Epigenetic modifications such as DNA methylation are associated with both human immunodeficiency virus (HIV) infection and type 2 diabetes mellitus (T2DM). We investigated epigenetic associations with T2DM according to HIV infection status and assessed interaction effects among 681 male participants of the Veterans Aging Cohort Study. Methylation at previously reported sites, cg1963031 (TXNIP), cg18181703 (SOCS3), and cg09152259 (PROC), was significantly associated with T2DM in HIV-infected individuals. We identified 3 novel associations with suggestive statistical significance: cg1231141 (ADAMTS2), cg19534769 (HGFAC), and cg13163919 (TLE3). Suggestive interaction with HIV infection status was found at cg17862404 (TSC22D1). The implicated genes are involved in inflammation, pancreatic β-cell function, and T2DM pathogenesis.

Indexed as

Cohort StudiesDiabetes Mellitus, Type 2DNA MethylationEpigenesis, GeneticGenetic MarkersHIV InfectionsHumansMaleMiddle AgedProspective StudiesVeteransGenetic MarkersDNA methylationepigenomeHIVType 2 Diabetes

Identifiers

PMID30649532
PMCPMC6534194
OpenAlexW2909735706

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.