Evidence map›Paper›PMID 30649274›Full record

ArticleFEMS microbiology ecology2019

Influence of physico-chemical characteristics of sediment on the in situ spatial distribution of F-specific RNA phages in the riverbed.

Blandine Fauvel, Henry-Michel Cauchie, Christophe Gantzer, Leslie Ogorzaly

Abstract read
In one paragraph

Article in FEMS microbiology ecology, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Article
  2. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

Blandine FauvelLuxembourg Institute of Science and Technology (LIST), Department of Environmental Research and Innovation (ERIN), 5 Avenue des Hauts-Fourneaux, 4362 Esch-sur-Alzette, LUXEMBOURG.
Henry-Michel CauchieLuxembourg Institute of Science and Technology (LIST), Department of Environmental Research and Innovation (ERIN), 5 Avenue des Hauts-Fourneaux, 4362 Esch-sur-Alzette, LUXEMBOURG.
Christophe GantzerUniversité de Lorraine, Laboratoire de Chimie, Physique et Microbiologie pour les Matériaux et l'Environnement (LCPME), UMR 7564, Faculté de Pharmacie, 5 Rue Albert Lebrun BP 80403 54001 Nancy, FRANCE.
Leslie OgorzalyLuxembourg Institute of Science and Technology (LIST), Department of Environmental Research and Innovation (ERIN), 5 Avenue des Hauts-Fourneaux, 4362 Esch-sur-Alzette, LUXEMBOURG.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Riverbed sediment is commonly described as an enteric virus reservoir and thought to play an important role in water column contamination, especially during rainfall events. Although the occurrence and fate of faecal-derived viruses are fairly well characterized in water, little information is available on their presence as their interactions with sediment. This study aimed at determining the main environmental factors responsible for the presence of enteric viruses in riverbed sediment. Using a combination of microbiological and physico-chemical analyses of freshly field-sampled sediments, we demonstrated their contamination by faecal phages. The in situ spatial distribution of phages in sediment was mainly driven by sediment composition. A preferential phage accumulation occurred along one bank of the river, where the quantity of fine sands and clay particles smaller than 0.2 mm was the highest. Additionally, a mineralogical analysis revealed the influence of the heterogeneous presence of virus sorbents such as quartz, calcite, carbonates and iron-bearing phases (goethite) on the phage spatial pattern. A more precise knowledge of the composition of riverbed sediment is therefore useful for predicting preferential areas of enteric virus accumulation and should allow more accurate microbial risk assessment when using surface water for drinking water production or recreational activities.

Indexed as

Environmental MonitoringFecesGeologic SedimentsRiversRNA PhagesSpatial AnalysisWater PollutantsWater PollutionWater Pollutants

Identifiers

PMID30649274
PMCPMC6333113

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.