Evidence map›Paper›PMID 30648970›Full record

ArticleeLife2019

Pat1 promotes processing body assembly by enhancing the phase separation of the DEAD-box ATPase Dhh1 and RNA.

Ruchika Sachdev, Maria Hondele, Miriam Linsenmeier, Pascal Vallotton, Christopher F Mugler, Paolo Arosio, Karsten Weis

Open access · goldAbstract read
In one paragraph

Article in eLife, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 38 papers.

0numbers the graph read from it
0cells of the map it votes in
38citing papers in PubMed
4.1field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

38 citing papers in PubMed, 70 citations in OpenAlex.

  1. Article
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  13. Quantitative reconstitution of yeast RNA processing bodies.Proceedings of the National Academy of Sciences of the United States of America · 2023
    Article
  14. Article
  15. Review
  16. Review
  17. Article
  18. Article
  19. Liquid-liquid phase separation in tumor biology.Signal transduction and targeted therapy · 2022
    Review
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 1 institution in 2 countries.

Ruchika SachdevETH Zurich, Zurich, Switzerland.ORCID 0000-0002-4472-3417
Maria HondeleETH Zurich, Zurich, Switzerland.ORCID 0000-0002-2733-2561
Miriam LinsenmeierETH Zurich, Zurich, Switzerland.
Pascal VallottonETH Zurich, Zurich, Switzerland.
Christopher F MuglerETH Zurich, Zurich, Switzerland.ORCID 0000-0001-8258-1192
Paolo ArosioETH Zurich, Zurich, Switzerland.
Karsten WeisETH Zurich, Zurich, Switzerland.ORCID 0000-0001-7224-925X
ETH Zurich · CH

Funding

Structure and function of the nuclear pore complexR01GM058065 · NIGMS · UNIVERSITY OF CALIFORNIA SAN FRANCISCO · PI HEALD, REBECCA W · 1998 to 2015
$4.6M
Mechanisms of gene-specific and genome-wide regulation of mRNA turnoverR01GM101257 · NIGMS · UNIVERSITY OF CALIFORNIA BERKELEY · PI THORNER, JEREMY W. · 2013 to 2016
$1.2M
ETH Zürich FEL-37-14-2Human Frontier Science Program LT000914/2015NIGMS NIH HHS R01 GM058065NIGMS NIH HHS R01GM058065NIGMS NIH HHS R01 GM101257NIGMS NIH HHS R01GM101257Schweizerischer Nationalfonds zur Förderung der Wissenschaftlichen Forschung 31003A_159731Schweizerischer Nationalfonds zur Förderung der Wissenschaftlichen Forschung 31003A_179275
6 · The paper itself

Abstract

Processing bodies (PBs) are cytoplasmic mRNP granules that assemble via liquid-liquid phase separation and are implicated in the decay or storage of mRNAs. How PB assembly is regulated in cells remains unclear. Previously, we identified the ATPase activity of the DEAD-box protein Dhh1 as a key regulator of PB dynamics and demonstrated that Not1, an activator of the Dhh1 ATPase and member of the CCR4-NOT deadenylase complex inhibits PB assembly

Indexed as

CycloheximideCytoplasmic GranulesDEAD-box RNA HelicasesMutationPhosphorylationProtein BindingRNA-Binding ProteinsRNA, FungalSaccharomyces cerevisiaeSaccharomyces cerevisiae ProteinsSterolsCycloheximideDEAD-box RNA HelicasesDHH1 protein, S cerevisiaehippuristanolPAT1 protein, S cerevisiaeRNA-Binding ProteinsRNA, FungalSaccharomyces cerevisiae ProteinsSterolsbiochemistrycell biologychemical biologymembraneless organellesmRNP granulesphase separationprocessing bodiesS. cerevisiae

Identifiers

PMID30648970
PMCPMC6366900
OpenAlexW2949748055

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.