Evidence map›Paper›PMID 30644400›Full record

ArticleNature communications2019

Structure of tRNA splicing enzyme Tpt1 illuminates the mechanism of RNA 2'-PO

Ankan Banerjee, Annum Munir, Leonora Abdullahu, Masad J Damha, Yehuda Goldgur, Stewart Shuman

Open access · goldAbstract read
In one paragraph

Article in Nature communications, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 21 papers.

0numbers the graph read from it
0cells of the map it votes in
21citing papers in PubMed
1.1field-weighted citation impact, top 23% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

21 citing papers in PubMed, 30 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Article
  6. Article
  7. Article
  8. Article
  9. Article
  10. Article
  11. Structural basis for Tpt1-catalyzed 2'-POProceedings of the National Academy of Sciences of the United States of America · 2023
    Article
  12. Article
  13. The life and times of a tRNA.RNA (New York, N.Y.) · 2023
    Review
  14. Article
  15. ADP-ribosylation systems in bacteria and viruses.Computational and structural biotechnology journal · 2021
    Review
  16. Article
  17. Review
  18. Article
  19. Review
  20. NADRNA (New York, N.Y.) · 2019
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 2 countries.

Ankan BanerjeeMolecular Biology and Structural Biology Programs, Sloan-Kettering Institute, New York, NY, 10065, USA.
Annum MunirMolecular Biology and Structural Biology Programs, Sloan-Kettering Institute, New York, NY, 10065, USA.
Leonora AbdullahuChemistry Department, McGill University, Montreal, Quebec, H3A0B8, Canada.
Masad J DamhaChemistry Department, McGill University, Montreal, Quebec, H3A0B8, Canada.
Yehuda GoldgurMolecular Biology and Structural Biology Programs, Sloan-Kettering Institute, New York, NY, 10065, USA.
Stewart ShumanMolecular Biology and Structural Biology Programs, Sloan-Kettering Institute, New York, NY, 10065, USA. s-shuman@ski.mskcc.org.
Kettering University · USMcGill University · CA

Funding

X-RAY CRYSTALLOGRAPHYP30CA008748 · NCI · SLOAN-KETTERING INSTITUTE FOR CANCER RES · PI Hongbiao Carl Lekaye · 1985 to 2026
$347.4M
Overall EvaluationP41GM103403 · NIGMS · CORNELL UNIVERSITY · PI EALICK, STEVEN E · 2012 to 2017
$14.3M
Mechanisms of DNA and RNA TransactionsR35GM126945 · NIGMS · SLOAN-KETTERING INST CAN RESEARCH · PI Stewart H Shuman · 2018 to 2026
$8.9M
New frontiers in extracellular signalingR35GM122575 · NIGMS · CORNELL UNIVERSITY · PI CERIONE, RICHARD A. · 2017 to 2021
$3.0M
Pixel Array Detector for X-ray CrystallographyS10RR029205 · NCRR · CORNELL UNIVERSITY · PI EALICK, STEVEN E · 2010 to 2010
$1.8M
NCI NIH HHS P30 CA008748NCRR NIH HHS S10 RR029205NIGMS NIH HHS P41 GM103403NIGMS NIH HHS R35 GM122575NIGMS NIH HHS R35 GM126945NIH HHS R35-GM122575
6 · The paper itself

Abstract

Tpt1 is an essential agent of fungal tRNA splicing that removes the 2'-PO

Indexed as

Acetivibrio thermocellusAdenosine Diphosphate RiboseAmino Acid SequenceBacterial ProteinsLigandsNADPhosphatesProtein ConformationRNA, TransferAdenosine Diphosphate RiboseADP-ribose 1''-phosphateBacterial ProteinsLigandsNADPhosphatesRNA, Transfer

Identifiers

PMID30644400
PMCPMC6333775
OpenAlexW2911052173

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.