Evidence map›Paper›PMID 30643298›Full record

ArticleNature neuroscience2019

Premature polyadenylation-mediated loss of stathmin-2 is a hallmark of TDP-43-dependent neurodegeneration.

Ze'ev Melamed, Jone López-Erauskin, Michael W Baughn, Ouyang Zhang, Kevin Drenner, Ying Sun, Fernande Freyermuth, Moira A McMahon, Melinda S Beccari, Jon W Artates and 10 more

Abstract read
In one paragraph

Article in Nature neuroscience, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 405 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
405citing papers in PubMed, 1 pooled it
36.8field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

405 citing papers in PubMed, 1 synthesis or guideline pooled it, 642 citations in OpenAlex.

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345 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

20 authors at 4 institutions in 1 country.

Ze'ev MelamedLudwig Institute for Cancer Research, University of California at San Diego, La Jolla, CA, USA.
Jone López-ErauskinLudwig Institute for Cancer Research, University of California at San Diego, La Jolla, CA, USA.
Michael W BaughnLudwig Institute for Cancer Research, University of California at San Diego, La Jolla, CA, USA.
Ouyang ZhangDepartment of Cellular and Molecular Medicine, University of California at San Diego, La Jolla, CA, USA.
Kevin DrennerLudwig Institute for Cancer Research, University of California at San Diego, La Jolla, CA, USA.
Ying SunLudwig Institute for Cancer Research, University of California at San Diego, La Jolla, CA, USA.
Fernande FreyermuthDepartment of Neurology, Massachusetts General Hospital, Harvard Medical School, Boston, MA, USA.
Moira A McMahonIonis Pharmaceuticals, Carlsbad, CA, USA.
Melinda S BeccariDepartment of Cellular and Molecular Medicine, University of California at San Diego, La Jolla, CA, USA.
Jon W ArtatesLudwig Institute for Cancer Research, University of California at San Diego, La Jolla, CA, USA.
Takuya OhkuboDepartment of Neurosciences, University of California, San Diego, La Jolla, CA, USA.
Maria RodriguezDepartment of Neurosciences, University of California, San Diego, La Jolla, CA, USA.
Nianwei LiniXCells Biotechnologies, San Diego, CA, USA.
Dongmei WuiXCells Biotechnologies, San Diego, CA, USA.
C Frank BennettIonis Pharmaceuticals, Carlsbad, CA, USA.
Frank RigoIonis Pharmaceuticals, Carlsbad, CA, USA.
Sandrine Da CruzLudwig Institute for Cancer Research, University of California at San Diego, La Jolla, CA, USA.
John RavitsDepartment of Neurosciences, University of California, San Diego, La Jolla, CA, USA.
Clotilde Lagier-TourenneDepartment of Neurology, Massachusetts General Hospital, Harvard Medical School, Boston, MA, USA. clagier-tourenne@mgh.harvard.edu.ORCID http://orcid.org/0000-0002-3058-8322
Don W ClevelandLudwig Institute for Cancer Research, University of California at San Diego, La Jolla, CA, USA. dcleveland@ucsd.edu.ORCID http://orcid.org/0000-0002-1934-3682
University of California San Diego · USIonis Pharmaceuticals (United States) · USBroad Institute · USLudwig Cancer Research · US

Funding

NEURONAL FILAMENT SYNTHESIS, ASSEMBLY, AND FUNCTIONR01NS027036 · NINDS · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI Bogdan Bintu, Don W Cleveland · 1989 to 2026
$11.8M
U of Calif, San Diego Neuroscience Microscopy ImagingP30NS047101 · NINDS · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI GLEESON, JOSEPH G, ZHENG, BINHAI · 2003 to 2022
$9.0M
Training Program in Basic Clinical GeneticsT32GM008666 · NIGMS · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI HAMILTON, BRUCE A · 1998 to 2021
$8.6M
Developing ASO Therapy for Repeat Expanded C9orf72 ALS-FTDR01NS088578 · NINDS · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI RAVITS, JOHN · 2014 to 2018
$2.1M
Using RNA signatures for therapy development in neurodegeneration due to C9orf72 expansionsR01NS087227 · NINDS · MASSACHUSETTS GENERAL HOSPITAL · PI LAGIER-TOURENNE, CLOTILDE · 2014 to 2018
$1.5M
NIGMS NIH HHS T32 GM008666NINDS NIH HHS P30 NS047101NINDS NIH HHS R01 NS027036NINDS NIH HHS R01 NS087227NINDS NIH HHS R01 NS088578
6 · The paper itself

Abstract

Amyotrophic lateral sclerosis (ALS) and frontotemporal dementia (FTD) are associated with loss of nuclear transactive response DNA-binding protein 43 (TDP-43). Here we identify that TDP-43 regulates expression of the neuronal growth-associated factor stathmin-2. Lowered TDP-43 levels, which reduce its binding to sites within the first intron of stathmin-2 pre-messenger RNA, uncover a cryptic polyadenylation site whose utilization produces a truncated, non-functional mRNA. Reduced stathmin-2 expression is found in neurons trans-differentiated from patient fibroblasts expressing an ALS-causing TDP-43 mutation, in motor cortex and spinal motor neurons from patients with sporadic ALS and familial ALS with GGGGCC repeat expansion in the C9orf72 gene, and in induced pluripotent stem cell (iPSC)-derived motor neurons depleted of TDP-43. Remarkably, while reduction in TDP-43 is shown to inhibit axonal regeneration of iPSC-derived motor neurons, rescue of stathmin-2 expression restores axonal regenerative capacity. Thus, premature polyadenylation-mediated reduction in stathmin-2 is a hallmark of ALS-FTD that functionally links reduced nuclear TDP-43 function to enhanced neuronal vulnerability.

Indexed as

Amyotrophic Lateral SclerosisDNA-Binding ProteinsFemaleHumansMembrane ProteinsMotor CortexMotor NeuronsNerve DegenerationPolyadenylationSpinal CordStathminDNA-Binding ProteinsMembrane ProteinsStathminSTMN2 protein, humanTARDBP protein, human

Identifiers

PMID30643298
PMCPMC6348009
OpenAlexW2910480975

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.