Evidence map›Paper›PMID 30643194›Full record

ArticleOncogene2019

Genome-wide screening identifies oncofetal lncRNA Ptn-dt promoting the proliferation of hepatocellular carcinoma cells by regulating the Ptn receptor.

Jin-Feng Huang, Hong-Yue Jiang, Hui Cai, Yan Liu, Yi-Qing Zhu, Sha-Sha Lin, Ting-Ting Hu, Tian-Tian Wang, Wen-Jun Yang, Bang Xiao and 4 more

Abstract read
PubMed Publisher
In one paragraph

Article in Oncogene, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 18 papers.

0numbers the graph read from it
0cells of the map it votes in
18citing papers in PubMed
1.5field-weighted citation impact, top 20% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

18 citing papers in PubMed, 31 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

14 authors at 3 institutions in 1 country.

Jin-Feng HuangDepartment of Medical Genetics, Second Military Medical University, 200433, Shanghai, China.
Hong-Yue JiangDepartment of Gastroenterology, Zhongshan Hospital, Fudan University, 200032, Shanghai, China.
Hui CaiDepartment of General Surgery, Changhai Hospital, Second Military Medical University, 200433, Shanghai, China.
Yan LiuDepartment of Medical Genetics, Second Military Medical University, 200433, Shanghai, China.
Yi-Qing ZhuDepartment of Medical Genetics, Second Military Medical University, 200433, Shanghai, China.
Sha-Sha LinCenter of Reproductive Medicine, Changhai Hospital, Second Military Medical University, 200433, Shanghai, China.
Ting-Ting HuCenter of Reproductive Medicine, Changhai Hospital, Second Military Medical University, 200433, Shanghai, China.
Tian-Tian WangDepartment of Medical Genetics, Second Military Medical University, 200433, Shanghai, China.
Wen-Jun YangDepartment of Medical Genetics, Second Military Medical University, 200433, Shanghai, China.
Bang XiaoDepartment of Medical Genetics, Second Military Medical University, 200433, Shanghai, China.
Shu-Han SunDepartment of Medical Genetics, Second Military Medical University, 200433, Shanghai, China.
Li-Ye MaDepartment of General Surgery, Changhai Hospital, Second Military Medical University, 200433, Shanghai, China. malydr@163.com.
Hui-Rong YinCenter of Reproductive Medicine, Changhai Hospital, Second Military Medical University, 200433, Shanghai, China. topyin@126.com.
Fang WangDepartment of Medical Genetics, Second Military Medical University, 200433, Shanghai, China. wfsjz@163.com.
Second Military Medical University · CNChanghai Hospital · CNSun Yat-sen University · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Oncofetal genes are genes that express abundantly in both fetal and tumor tissues yet downregulated or undetected in adult tissues, and can be used as tumor markers for cancer diagnosis and treatment. Meanwhile, long noncoding RNAs (lncRNAs) are known to play crucial roles in the pathogenesis of hepatocellular carcinoma (HCC), including tumor growth, proliferation, metastasis, invasion, and recurrence. We performed a genome-wide screening using microarrays to detect the lncRNA expression profiles in fetal livers, adult livers, and liver cancer tissues from mice to identify oncofetal lncRNAs in HCC. From the microarray data analysis, we identified lncRNA Ptn-dt as a possible oncofetal gene. Both in vitro and in vivo experiments results confirmed that overexpression of Ptn-dt significantly promoted the proliferation of mouse HCC cells. RNA pulldown assay showed that Ptn-dt could interact with the HuR protein. Interestingly, miR-96 binds with HuR to maintain its stability as well. Overexpression of lncRNA Ptn-dt led to the downregulation of miR-96, which might be due to the interaction between Ptn-dt and HuR. Meanwhile, previous studies have reported that Ptn can promote tumor growth and vascular abnormalization via anaplastic lymphoma kinase (Alk) signaling. In our study, we found that overexpression of Ptn-dt could promote the expression of Alk through repressing miR-96 via interacting with HuR, thus enhancing the biologic function of Ptn. In summary, a new oncofetal lncRNA Ptn-dt is identified, and it can promote the proliferation of HCC cells by regulating the HuR/miR-96/Alk pathway and Ptn-Alk axis.

Indexed as

Anaplastic Lymphoma KinaseAnimalsBiomarkers, TumorCarcinoma, HepatocellularCarrier ProteinsCell Line, TumorCell ProliferationCytokinesDown-RegulationGenome-Wide Association StudyLiver NeoplasmsMaleMiceMice, Inbred BALB CMice, Inbred C57BLMice, NudeAnaplastic Lymphoma KinaseBiomarkers, TumorCarrier ProteinsCytokinesMicroRNAspleiotrophinRNA, Long Noncoding

Identifiers

PMID30643194
OpenAlexW2910542354

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.