Evidence map›Paper›PMID 30643177›Full record

ArticleScientific reports2019

Identification of Chondrocyte Genes and Signaling Pathways in Response to Acute Joint Inflammation.

Mengxi Lv, Yilu Zhou, Shawn W Polson, Leo Q Wan, Meiqing Wang, Lin Han, Liyun Wang, X Lucas Lu

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 42 papers.

0numbers the graph read from it
0cells of the map it votes in
42citing papers in PubMed
5.0field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

42 citing papers in PubMed, 75 citations in OpenAlex.

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  11. Triamcinolone acetonide has minimal effect on short- and long-term metabolic activities of cartilage.Journal of orthopaedic research : official publication of the Orthopaedic Research Society · 2024
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 4 institutions in 2 countries.

Mengxi LvDepartment of Mechanical Engineering, University of Delaware, Newark, DE, United States.
Yilu ZhouDepartment of Mechanical Engineering, University of Delaware, Newark, DE, United States.
Shawn W PolsonCenter for Bioinformatics and Computational Biology, University of Delaware, Newark, DE, United States.
Leo Q WanDepartment of Biomedical Engineering, Rensselaer Polytechnic Institute, Troy, NY, United States.
Meiqing WangDepartment of Oral Anatomy and Physiology and TMD, the Fourth Military Medical University, Xi'an, Shanxi, China.
Lin HanSchool of Biomedical Engineering, Science, and Health Systems, Drexel University, Philadelphia, PA, United States.ORCID http://orcid.org/0000-0003-4180-1288
Liyun WangDepartment of Mechanical Engineering, University of Delaware, Newark, DE, United States.
X Lucas LuDepartment of Mechanical Engineering, University of Delaware, Newark, DE, United States. xlu@udel.edu.
University of Delaware · USAir Force Medical University · CNDrexel University · USRensselaer Polytechnic Institute · US

Funding

Predictive Modeling & Optimal Control Framework for Model-Based Epidemic Response in DelawareP20GM103446 · NIGMS · UNIVERSITY OF DELAWARE · PI Anjana Narayan Bhat · 2012 to 2026
$67.2M
Supplement to R01 Titled: Mechanosensing in the Bone Lacunar-Canalicular SystemR01AR054385 · NIAMS · UNIVERSITY OF DELAWARE · PI FARACH-CARSON, MARY C, WANG, LIYUN · 2007 to 2019
$3.8M
Roles of Decorin and Biglycan in Cartilage Nanomechanics and OsteoarthritisR21AR066824 · NIAMS · DREXEL UNIVERSITY · PI HAN, LIN · 2015 to 2016
$357k
Foundation for the National Institutes of Health (Foundation for the National Institutes of Health, Inc.) AR054385Foundation for the National Institutes of Health (Foundation for the National Institutes of Health, Inc.) AR066824NIAMS NIH HHS R01 AR054385NIAMS NIH HHS R21 AR066824NIGMS NIH HHS P20 GM103446U.S. Department of Defense (United States Department of Defense) W81XWH-13-1-0148
6 · The paper itself

Abstract

Traumatic joint injuries often result in elevated proinflammatory cytokine (such as IL-1β) levels in the joint cavity, which can increase the catabolic activities of chondrocytes and damage cartilage. This study investigated the early genetic responses of healthy in situ chondrocytes under IL-1β attack with a focus on cell cycle and calcium signaling pathways. RNA sequencing analysis identified 2,232 significantly changed genes by IL-1β, with 1,259 upregulated and 973 downregulated genes. Catabolic genes related to ECM degeneration were promoted by IL-1β, consistent with our observations of matrix protein loss and mechanical property decrease during 24-day in vitro culture of cartilage explants. IL-1β altered the cell cycle (108 genes) and Rho GTPases signaling (72 genes) in chondrocytes, while chondrocyte phenotypic shift was observed with histology, cell volume measurement, and MTT assay. IL-1β inhibited the spontaneous calcium signaling in chondrocytes, a fundamental signaling event in chondrocyte metabolic activities. The expression of 24 genes from 6 calcium-signaling related pathways were changed by IL-1β exposure. This study provided a comprehensive list of differentially expressed genes of healthy in situ chondrocytes in response to IL-1β attack, which represents a useful reference to verify and guide future cartilage studies related to the acute inflammation after joint trauma.

Indexed as

Cell CycleAnimalsCalcium SignalingCattleCells, CulturedChondrocytesGene Expression ProfilingInterleukin-1betaSequence Analysis, RNASignal TransductionInterleukin-1beta

Identifiers

PMID30643177
PMCPMC6331554
OpenAlexW2908560042

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.