Evidence map›Paper›PMID 30643170›Full record

ArticleScientific reports2019

Altered spinogenesis in iPSC-derived cortical neurons from patients with autism carrying de novo SHANK3 mutations.

Laura Gouder, Aline Vitrac, Hany Goubran-Botros, Anne Danckaert, Jean-Yves Tinevez, Gwenaëlle André-Leroux, Ekaterina Atanasova, Nathalie Lemière, Anne Biton, Claire S Leblond and 7 more

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 38 papers.

0numbers the graph read from it
0cells of the map it votes in
38citing papers in PubMed
3.9field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

38 citing papers in PubMed, 69 citations in OpenAlex.

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  12. Functional maturation of human iPSC-derived pyramidal neuronsFrontiers in cellular neuroscience · 2023
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

17 authors at 5 institutions in 1 country.

Laura GouderHuman Genetics and Cognitive Functions, Institut Pasteur, Paris, France.
Aline VitracHuman Genetics and Cognitive Functions, Institut Pasteur, Paris, France.
Hany Goubran-BotrosHuman Genetics and Cognitive Functions, Institut Pasteur, Paris, France.
Anne DanckaertImagopole, Citech, Institut Pasteur, Paris, France.
Jean-Yves TinevezImagopole, Citech, Institut Pasteur, Paris, France.ORCID http://orcid.org/0000-0002-0998-4718
Gwenaëlle André-LerouxMaIAGE, INRA, Université Paris-Saclay, 78350, Jouy-en-Josas, France.
Ekaterina AtanasovaHuman Genetics and Cognitive Functions, Institut Pasteur, Paris, France.
Nathalie LemièreHuman Genetics and Cognitive Functions, Institut Pasteur, Paris, France.
Anne BitonBioinformatics and Biostatistics Hub, C3BI, USR 3756 IP CNRS, Institut Pasteur, Paris, France.
Claire S LeblondHuman Genetics and Cognitive Functions, Institut Pasteur, Paris, France.
Aurélie PouletCECS, I-STEM, AFM, 91030, Evry Cedex, France.
Anne BolandCentre National de Recherche en Génomique Humaine (CNRGH), Institut de Biologie François Jacob, CEA, Université Paris-Saclay, F-91057, Evry, France.
Jean-François DeleuzeCentre National de Recherche en Génomique Humaine (CNRGH), Institut de Biologie François Jacob, CEA, Université Paris-Saclay, F-91057, Evry, France.
Alexandra BenchouaCECS, I-STEM, AFM, 91030, Evry Cedex, France.
Richard DelormeHuman Genetics and Cognitive Functions, Institut Pasteur, Paris, France.
Thomas BourgeronHuman Genetics and Cognitive Functions, Institut Pasteur, Paris, France.
Isabelle Cloëz-TayaraniHuman Genetics and Cognitive Functions, Institut Pasteur, Paris, France. isabelle.cloez-tayarani@pasteur.fr.
Centre National de la Recherche Scientifique · FRInstitut Pasteur · FRCommissariat à l'Énergie Atomique et aux Énergies Alternatives · FRInstitut des Cellules Souches pour le Traitement et l'Étude des Maladies Monogéniques · FRUniversité Paris-Saclay · FR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The synaptic protein SHANK3 encodes a multidomain scaffold protein expressed at the postsynaptic density of neuronal excitatory synapses. We previously identified de novo SHANK3 mutations in patients with autism spectrum disorders (ASD) and showed that SHANK3 represents one of the major genes for ASD. Here, we analyzed the pyramidal cortical neurons derived from induced pluripotent stem cells from four patients with ASD carrying SHANK3 de novo truncating mutations. At 40-45 days after the differentiation of neural stem cells, dendritic spines from pyramidal neurons presented variable morphologies: filopodia, thin, stubby and muschroom, as measured in 3D using GFP labeling and immunofluorescence. As compared to three controls, we observed a significant decrease in SHANK3 mRNA levels (less than 50% of controls) in correlation with a significant reduction in dendritic spine densities and whole spine and spine head volumes. These results, obtained through the analysis of de novo SHANK3 mutations in the patients' genomic background, provide further support for the presence of synaptic abnormalities in a subset of patients with ASD.

Indexed as

MutationAutistic DisorderCell DifferentiationDendritesHumansInduced Pluripotent Stem CellsMicroscopy, FluorescenceNerve Tissue ProteinsPyramidal CellsSequence DeletionNerve Tissue ProteinsSHANK3 protein, human

Identifiers

PMID30643170
PMCPMC6331634
OpenAlexW2910181891

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.