Evidence map›Paper›PMID 30642989›Full record

ArticleJournal of bacteriology2019

Cystic Fibrosis-Associated Stenotrophomonas maltophilia Strain-Specific Adaptations and Responses to pH.

Tara Gallagher, Joann Phan, Andrew Oliver, Alexander B Chase, Whitney E England, Stephen Wandro, Clark Hendrickson, Stefan F Riedel, Katrine Whiteson

Open access · hybridAbstract read
PubMed Full text at PMC Publisher
In one paragraph

Article in Journal of bacteriology, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
1.7field-weighted citation impact, top 19% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 15 citations in OpenAlex.

  1. Article
  2. Article
  3. A guide toFrontiers in cellular and infection microbiology · 2023
    Review
  4. Article
  5. Article
  6. Article
  7. Genomic information on Stenotrophomonas maltophilia ST264 isolated from a cystic fibrosis pediatric patient in Brazil.Brazilian journal of microbiology : [publication of the Brazilian Society for Microbiology] · 2020
    Article
  8. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 1 institution in 1 country.

Tara GallagherDepartment of Molecular Biology and Biochemistry, University of California, Irvine, California, USA.
Joann PhanDepartment of Molecular Biology and Biochemistry, University of California, Irvine, California, USA.
Andrew OliverDepartment of Molecular Biology and Biochemistry, University of California, Irvine, California, USA.
Alexander B ChaseDepartment of Ecology and Evolutionary Biology, University of California, Irvine, California, USA.
Whitney E EnglandDepartment of Molecular Biology and Biochemistry, University of California, Irvine, California, USA.
Stephen WandroDepartment of Molecular Biology and Biochemistry, University of California, Irvine, California, USA.
Clark HendricksonDepartment of Molecular Biology and Biochemistry, University of California, Irvine, California, USA.
Stefan F RiedelDepartment of Molecular Biology and Biochemistry, University of California, Irvine, California, USA.
Katrine WhitesonDepartment of Molecular Biology and Biochemistry, University of California, Irvine, California, USA katrine@uci.edu.ORCID 0000-0002-5423-6014
University of California, Irvine · US

Funding

West Coast Central Comprehensive Metabolomics Resource Core (WC3MRC)U24DK097154 · NIDDK · UNIVERSITY OF CALIFORNIA AT DAVIS · PI FIEHN, OLIVER · 2012 to 2017
$9.9M
Omics of pulmonary exacerbations in cystic fibrosisR56HL126754 · NHLBI · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI LIPUMA, JOHN J · 2016 to 2016
$388k
NHLBI NIH HHS R56 HL126754NIDDK NIH HHS U24 DK097154
6 · The paper itself

Abstract

The airway fluids of cystic fibrosis (CF) patients contain local pH gradients and are more acidic than those of healthy individuals. pH is a critical factor that is often overlooked in studies seeking to recapitulate the infection microenvironment. We sought to determine the impact of pH on the physiology of a ubiqituous yet understudied microbe,

Indexed as

Adaptation, PhysiologicalCystic FibrosisGene Expression ProfilingGram-Negative Bacterial InfectionsHumansHydrogen-Ion ConcentrationStenotrophomonas maltophiliaacidiccystic fibrosispHStenotrophomonastranscriptome

Identifiers

PMID30642989
PMCPMC6416904
OpenAlexW2910209630

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.