Evidence map›Paper›PMID 30640896›Full record

ArticlePloS one2019

SENP3-mediated host defense response contains HBV replication and restores protein synthesis.

Rui Xi, Preetish Kadur Lakshminarasimha Murthy, Kuei-Ling Tung, Cynthia D Guy, Ji Wan, Feng Li, Zhuo Wang, Xiaodong Li, Anastasia Varanko, Nikolai Rakhilin and 6 more

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
0.6field-weighted citation impact, top 34% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 13 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Abnormal protein SUMOylation in liver disease: novel target for therapy.Journal of molecular medicine (Berlin, Germany) · 2024
    Review
  5. SUMOylation in Viral Replication and Antiviral Defense.Advanced science (Weinheim, Baden-Wurttemberg, Germany) · 2022
    Review
  6. Article
  7. Review
  8. Article
  9. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

16 authors at 5 institutions in 2 countries.

Rui XiDepartment of Biomedical Engineering, Pratt School of Engineering, Duke University, Durham, North Carolina, United States of America.
Preetish Kadur Lakshminarasimha MurthyDepartment of Biomedical Engineering, Pratt School of Engineering, Duke University, Durham, North Carolina, United States of America.
Kuei-Ling TungDuke Center for Genomic and Computational Biology, Duke University, Durham, North Carolina, United States of America.
Cynthia D GuyDepartment of Pathology, Duke University School of Medicine, Durham, North Carolina, United States of America.
Ji WanDivision of Nutritional Science, College of Human Ecology, Cornell University, Ithaca, New York, United States of America.
Feng LiLineberger Comprehensive Cancer Center, School of Medicine, University of North Carolina at Chapel Hill, Chapel Hill, North Carolina, United States of America.ORCID 0000-0003-3169-6349
Zhuo WangLineberger Comprehensive Cancer Center, School of Medicine, University of North Carolina at Chapel Hill, Chapel Hill, North Carolina, United States of America.
Xiaodong LiLineberger Comprehensive Cancer Center, School of Medicine, University of North Carolina at Chapel Hill, Chapel Hill, North Carolina, United States of America.
Anastasia VarankoDepartment of Biological and Environmental Engineering, Cornell University, Ithaca, New York, United States of America.
Nikolai RakhilinDepartment of Biomedical Engineering, Pratt School of Engineering, Duke University, Durham, North Carolina, United States of America.
Yongning XinDepartment of Gastroenterology, Qingdao Municipal Hospital, Qingdao, China.
Botao LiuProgram in Molecular Medicine, University of Massachusetts Medical School, Worcester, Massachusetts, United States of America.
Shu-Bing QianDivision of Nutritional Science, College of Human Ecology, Cornell University, Ithaca, New York, United States of America.
Lishan SuLineberger Comprehensive Cancer Center, School of Medicine, University of North Carolina at Chapel Hill, Chapel Hill, North Carolina, United States of America.
Yan HanDepartment of Biomedical Engineering, Pratt School of Engineering, Duke University, Durham, North Carolina, United States of America.
Xiling ShenDepartment of Biomedical Engineering, Pratt School of Engineering, Duke University, Durham, North Carolina, United States of America.ORCID 0000-0002-4978-3531
Duke University · USUniversity of North Carolina at Chapel Hill · USCornell University · USQingdao University · CNUniversity of Massachusetts Chan Medical School · US

Funding

Robust Control of the Stem Cell NicheR35GM122465 · NIGMS · TERASAKI INSTITUTE FOR BIOMEDICAL INNOVATION · PI Xiling Shen · 2017 to 2026
$5.6M
An organotypic model recapitulating colon cancer microenvironment and metastasisU01CA214300 · NCI · UT SOUTHWESTERN MEDICAL CENTER · PI HUANG, EMINA HUI-NA, SHEN, XILING · 2017 to 2021
$3.1M
O-GlcNAc Signaling in Translational Control of Stress ResponseR01GM122814 · NIGMS · CORNELL UNIVERSITY · PI QIAN, SHU-BING · 2017 to 2020
$1.3M
Metabolic Reprogramming of Colon Cancer Liver MetastasisR21CA201963 · NCI · DUKE UNIVERSITY · PI LOCASALE, JASON W., SHEN, XILING · 2016 to 2017
$380k
NCI NIH HHS R21 CA201963NCI NIH HHS U01 CA214300NIGMS NIH HHS R01 GM122814NIGMS NIH HHS R35 GM122465
6 · The paper itself

Abstract

Certain organs are capable of containing the replication of various types of viruses. In the liver, infection of Hepatitis B virus (HBV), the etiological factor of Hepatitis B and hepatocellular carcinoma (HCC), often remains asymptomatic and leads to a chronic carrier state. Here we investigated how hepatocytes contain HBV replication and promote their own survival by orchestrating a translational defense mechanism via the stress-sensitive SUMO-2/3-specific peptidase SENP3. We found that SENP3 expression level decreased in HBV-infected hepatocytes in various models including HepG2-NTCP cell lines and a humanized mouse model. Downregulation of SENP3 reduced HBV replication and boosted host protein translation. We also discovered that IQGAP2, a Ras GTPase-activating-like protein, is a key substrate for SENP3-mediated de-SUMOylation. Downregulation of SENP3 in HBV infected cells facilitated IQGAP2 SUMOylation and degradation, which leads to suppression of HBV gene expression and restoration of global translation of host genes via modulation of AKT phosphorylation. Thus, The SENP3-IQGAP2 de-SUMOylation axis is a host defense mechanism of hepatocytes that restores host protein translation and suppresses HBV gene expression.

Indexed as

AnimalsCysteine EndopeptidasesDown-RegulationGene Expression Regulation, ViralGene Knockdown TechniquesHepatitis BHepatitis B virusHepatocytesHep G2 CellsHost Microbial InteractionsHumansMiceMice, TransgenicModels, BiologicalProto-Oncogene Proteins c-aktras GTPase-Activating ProteinsCysteine EndopeptidasesIQGAP2 protein, humanProto-Oncogene Proteins c-aktras GTPase-Activating ProteinsSENP3 protein, human

Identifiers

PMID30640896
PMCPMC6331149
OpenAlexW2910029702

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.