ArticleMolecular phylogenetics and evolution2019
Genome-scale phylogenetics reveals a monophyletic Zoopagales (Zoopagomycota, Fungi).
Article in Molecular phylogenetics and evolution, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 18 papers.
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Who cites it
18 citing papers in PubMed.
- Single-Thallus Genomics of Ejectosporus trisporus, an Unculturable Stonefly Gut Fungal Symbiont.Environmental microbiology · 2026Article
- Biodiverse Compounds from Angiosperms and Gymnosperms: A Chemical, Nutritional, and Microbiological Approach.Microorganisms · 2026Article
- Endosymbiotic interactions in the fungal kingdom: a framework for progressive endosymbiosis.Frontiers in microbiology · 2026Review
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- Fungi dominate eukaryotic microbial assemblages in hot spring biofilms of East and Southeast Asia.Environmental microbiome · 2025Article
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- Prevalence and diversity of TAL effector-like proteins in fungal endosymbioticMicrobial genomics · 2024Article
- Fungal taxonomy: A puzzle with many missing piecesBiomedica : revista del Instituto Nacional de Salud · 2023Article
- Sequencing the Genomes of the First Terrestrial Fungal Lineages: What Have We Learned?Microorganisms · 2023Review
- Mycoparasites, Gut Dwellers, and Saprotrophs: Phylogenomic Reconstructions and Comparative Analyses of Kickxellomycotina Fungi.Genome biology and evolution · 2023Article
- Phylogenomic Analyses of 2,786 Genes in 158 Lineages Support a Root of the Eukaryotic Tree of Life between Opisthokonts and All Other Lineages.Genome biology and evolution · 2022Article
- A genome-scale phylogeny of the kingdom Fungi.Current biology : CB · 2021Article
- Utilization of cobalamin is ubiquitous in early-branching fungal phyla.Genome biology and evolution · 2021Article
- Improving Fungal Cultivability for Natural Products Discovery.Frontiers in microbiology · 2021Review
- SCGid: a consensus approach to contig filtering and genome prediction from single-cell sequencing libraries of uncultured eukaryotes.Bioinformatics (Oxford, England) · 2020Article
- Fungal evolution: diversity, taxonomy and phylogeny of the Fungi.Biological reviews of the Cambridge Philosophical Society · 2019Article
- Fungal evolution: major ecological adaptations and evolutionary transitions.Biological reviews of the Cambridge Philosophical Society · 2019Review
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Authors and funding
10 authors.
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Abstract
Previous genome-scale phylogenetic analyses of Fungi have under sampled taxa from Zoopagales; this order contains many predacious or parasitic genera, and most have never been grown in pure culture. We sequenced the genomes of 4 zoopagalean taxa that are predators of amoebae, nematodes, or rotifers and the genome of one taxon that is a parasite of amoebae using single cell sequencing methods with whole genome amplification. Each genome was a metagenome, which was assembled and binned using multiple techniques to identify the target genomes. We inferred phylogenies with both super matrix and coalescent approaches using 192 conserved proteins mined from the target genomes and performed ancestral state reconstructions to determine the ancestral trophic lifestyle of the clade. Our results indicate that Zoopagales is monophyletic. Ancestral state reconstructions provide moderate support for mycoparasitism being the ancestral state of the clade.
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