Evidence map›Paper›PMID 30637572›Full record

ArticlePlant molecular biology2019

Loss of Arabidopsis Halotolerance 2-like (AHL), a 3'-phosphoadenosine-5'-phosphate phosphatase, suppresses insensitive response of Arabidopsis thaliana ring zinc finger 1 (atrzf1) mutant to abiotic stress.

Da-Jeong Shin, Ji-Hee Min, Tinh Van Nguyen, Young-Min Kim, Cheol Soo Kim

Abstract read
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Article in Plant molecular biology, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
2.6field-weighted citation impact, top 10% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 17 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 1 institution in 1 country.

Da-Jeong ShinDepartment of Plant Biotechnology, Chonnam National University, Gwangju, 61186, Republic of Korea.
Ji-Hee MinDepartment of Plant Biotechnology, Chonnam National University, Gwangju, 61186, Republic of Korea.
Tinh Van NguyenDepartment of Plant Biotechnology, Chonnam National University, Gwangju, 61186, Republic of Korea.
Young-Min KimDepartment of Food Science & Technology, Chonnam National University, Gwangju, 61186, Republic of Korea.
Cheol Soo KimDepartment of Plant Biotechnology, Chonnam National University, Gwangju, 61186, Republic of Korea. cskim626@jnu.ac.kr.
Chonnam National University · KR

Funding

Basic Science Research Program 2018R1D1A1B07045242Next-Generation BioGreen21 program (SSAC) PJ013171
6 · The paper itself

Abstract

key messageDestruction of PAP phosphatase AHL suppresses atrzf1 phenotype in abiotic stress responses. AHL plays an intermediate role in the regulation of proline accumulation by PAP nucleotidase. Proline (Pro) metabolism is important for environmental responses, plant development, and growth. However, the role of Pro in abiotic stress process is unclear. Using atrzf1 (Arabidopsis thaliana ring zinc finger 1) mutant as a parental line for T-DNA tagging mutagenesis, we identified a suppressor mutant designated as proline content alterative 17 (pca17) that suppressed insensitivity of atrzf1 to abiotic stresses during early seedling growth. Pro content of pca17 was lower than that in both wild type (WT) and atrzf1 while complementary lines were less sensitive to abscisic acid (ABA) and abiotic stresses compared to WT. Thermal Asymmetric Interlaced (TAIL)-PCR of pca17 showed that T-DNA was inserted at site of At5g54390 (AHL for Arabidopsis Halotolerance 2-like) encoding 3'-phosphoadenosine-5'-phosphate (PAP) phosphatase. Under drought stress condition, products of sulfate metabolism such as PAP and adenosine monophosphate were significantly lower in pca17 than those in WT and atrzf1. Furthermore, pca17 showed significantly higher levels of several important drought parameters including malondialdehyde, ion leakage, and water loss than WT and atrzf1. Fluorescence signal of green fluorescent protein (GFP)-tagged AHL was quite strong in nuclei of the root and guard cells of transgenic seedlings. Additionally, AHL promoter-β-glucuronidase (GUS) construct revealed substantial gene expression in vasculature tissues and pollen. Collectively, these findings demonstrate that pca17 acts as a dominant suppressor mutant of atrzf1 in abiotic stress response by modulating proline and sulfate metabolism.

Indexed as

Stress, PhysiologicalAbscisic AcidAdenosine DiphosphateAdenosine MonophosphateAmino Acid SequenceArabidopsisArabidopsis ProteinsDNA-Binding ProteinsDroughtsGene Expression Regulation, PlantGenes, PlantGreen Fluorescent ProteinsHydrogen PeroxideMalondialdehydeMannitolMutationAbscisic Acidadenosine 3'-phosphate-5'-phosphateAdenosine DiphosphateAdenosine MonophosphateArabidopsis ProteinsDNA-Binding ProteinsGreen Fluorescent ProteinsHydrogen PeroxideMalondialdehydeMannitolPhosphoric Monoester HydrolasesProlineRZF1 protein, ArabidopsisSulfatesAbiotic stress responseAdenosine monophosphateAtRZF1PAP pathwaypca mutantProline

Identifiers

PMID30637572
OpenAlexW2909829734

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.