Evidence map›Paper›PMID 30636112›Full record

ArticleThe FEBS journal2019

Structural and functional characterization of a frataxin from a thermophilic organism.

Masooma Rasheed, Mostafa Jamshidiha, Rita Puglisi, Robert Yan, Ernesto Cota, Annalisa Pastore

Open access · hybridAbstract read
In one paragraph

Article in The FEBS journal, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
0.3field-weighted citation impact, top 49% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed, 5 citations in OpenAlex.

  1. Review
  2. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 3 institutions in 2 countries.

Masooma RasheedKing's College London, UK.
Mostafa JamshidihaDepartment of Life Sciences, Imperial College, London, South Kensington, UK.
Rita PuglisiKing's College London, UK.
Robert YanKing's College London, UK.
Ernesto CotaDepartment of Life Sciences, Imperial College, London, South Kensington, UK.
Annalisa PastoreKing's College London, UK.
Imperial College London · GBKing's College London · GBUK Dementia Research Institute · GB

Funding

Medical Research Council MC_U117533887
6 · The paper itself

Abstract

Frataxins form an interesting family of iron-binding proteins with an almost unique fold and are highly conserved from bacteria to primates. They have a pivotal role in iron-sulfur cluster biogenesis as regulators of the rates of cluster formation, as it is testified by the fact that frataxin absence is incompatible with life and reduced levels of the protein lead to the recessive neurodegenerative disease Friedreich's ataxia. Despite its importance, the structure of frataxin has been solved only from relatively few species. Here, we discuss the X-ray structure of frataxin from the thermophilic fungus Chaetomium thermophilum, and the characterization of its interactions and dynamics in solution. We show that this eukaryotic frataxin has an unusual variation in the classical frataxin fold: the last helix is shorter than in other frataxins which results in a less symmetrical and compact structure. The stability of this protein is comparable to that of human frataxin, currently the most stable among the frataxin orthologues. We also characterized the iron-binding mode of Ct frataxin and demonstrated that it binds it through a semiconserved negatively charged ridge on the first helix and beta-strand. Moreover, this frataxin is also able to bind the bacterial ortholog of the desulfurase, which is central in iron-sulfur cluster synthesis, and act as its inhibitor.

Indexed as

Amino Acid SequenceBinding SitesCarbon-Sulfur LyasesChaetomiumCloning, MolecularCrystallography, X-RayEscherichia coliEscherichia coli ProteinsFrataxinFungal ProteinsGene ExpressionHumansIronIron-Binding ProteinsIron-Sulfur ProteinsKineticsCarbon-Sulfur Lyasescysteine desulfuraseEscherichia coli ProteinsFrataxinFungal ProteinsIronIron-Binding ProteinsIron-Sulfur ProteinsIscU protein, E coliRecombinant ProteinsFriedreich's ataxiairon-sulfur clustersstructural biology

Identifiers

PMID30636112
PMCPMC6506826
OpenAlexW2910655228

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.