Evidence map›Paper›PMID 30635612›Full record

ArticleScientific reports2019

The Metabolic Response to a Low Amino Acid Diet is Independent of Diet-Induced Shifts in the Composition of the Gut Microbiome.

Heidi H Pak, Nicole E Cummings, Cara L Green, Jacqueline A Brinkman, Deyang Yu, Jay L Tomasiewicz, Shany E Yang, Colin Boyle, Elizabeth N Konon, Irene M Ong and 1 more

Registry-linked trialOpen access · goldAbstract read
In one paragraph

Article in Scientific reports, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. It is linked to trial NCT05906641 (Modulation of Secondary Bile Acids Through the Intestinal Microbiota After Consumption of a High-protein Diet.), which is not on this map. Cited by 19 papers.

0numbers the graph read from it
0cells of the map it votes in
19citing papers in PubMed
1.5field-weighted citation impact, top 17% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

NCT05906641 nacompletednot on this mapstarted 2023, after this paper: background citation

Modulation of Secondary Bile Acids Through the Intestinal Microbiota After Consumption of a High-protein Diet.

TypeinterventionalSponsorInstituto Nacional de Ciencias Medicas y Nutricion Salvador ZubiranRan2023 to 2023Enrolled22ConditionsHealthyArmsHigh-protein diet
3 · Its place in the literature

Who cites it

19 citing papers in PubMed, 24 citations in OpenAlex.

  1. Article
  2. Review
  3. Article
  4. Article
  5. Article
  6. A Review of Modulation of Gut Microbiota to Mitigate Gestational Diabetes: Implications for Maternal and Child Health.Medical science monitor : international medical journal of experimental and clinical research · 2025
    Review
  7. Article
  8. Article
  9. Article
  10. Article
  11. Epigenetic Links between Microbiota and Gestational Diabetes.International journal of molecular sciences · 2022
    Review
  12. Article
  13. Article
  14. The link among microbiota, epigenetics, and disease development.Environmental science and pollution research international · 2021
    Review
  15. Article
  16. The Gut Microbiota and Inflammation: An Overview.International journal of environmental research and public health · 2020
    Review
  17. Review
  18. Article
  19. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 3 institutions in 1 country.

Heidi H PakWilliam S. Middleton Memorial Veterans Hospital, Madison, WI, USA.
Nicole E CummingsWilliam S. Middleton Memorial Veterans Hospital, Madison, WI, USA.
Cara L GreenWilliam S. Middleton Memorial Veterans Hospital, Madison, WI, USA.
Jacqueline A BrinkmanWilliam S. Middleton Memorial Veterans Hospital, Madison, WI, USA.
Deyang YuWilliam S. Middleton Memorial Veterans Hospital, Madison, WI, USA.
Jay L TomasiewiczWilliam S. Middleton Memorial Veterans Hospital, Madison, WI, USA.
Shany E YangWilliam S. Middleton Memorial Veterans Hospital, Madison, WI, USA.
Colin BoyleWilliam S. Middleton Memorial Veterans Hospital, Madison, WI, USA.
Elizabeth N KononWilliam S. Middleton Memorial Veterans Hospital, Madison, WI, USA.
Irene M OngDepartment of Obstetrics and Gynecology, University of Wisconsin-Madison, Madison, WI, USA.
Dudley W LammingWilliam S. Middleton Memorial Veterans Hospital, Madison, WI, USA. dlamming@medicine.wisc.edu.ORCID http://orcid.org/0000-0002-0079-4467
University of Wisconsin–Madison · USUniversity of Wisconsin System · USWilliam S. Middleton Memorial Veterans Hospital · US

Funding

UW COMPREHENSIVE CANCER CENTER SUPPORTP30CA014520 · NCI · UNIVERSITY OF WISCONSIN-MADISON · PI AMY TRENTHAM-DIETZ · 1985 to 2026
$142.6M
University of Wisconsin Institute for Clinical and Translational ResearchUL1TR002373 · NCATS · UNIVERSITY OF WISCONSIN-MADISON · PI ELIZABETH S BURNSIDE, Allan R. Brasier · 2017 to 2026
$75.9M
WU P&FP30DK020579 · NIDDK · WASHINGTON UNIVERSITY · PI Jennifer Lynn Powers Carson · 2013 to 2026
$27.1M
Biology of Aging and Age-Related Diseases Training GrantT32AG000213 · NIA · UNIVERSITY OF WISCONSIN-MADISON · PI Rozalyn M. Anderson, Sanjay Asthana · 1991 to 2026
$9.9M
The regulation of health and longevity by branched-chain amino acidsR01AG056771 · NIA · UNIVERSITY OF WISCONSIN-MADISON · PI Dudley William Lamming · 2018 to 2026
$3.1M
The regulation of health and longevity by branched-chain amino acidsRF1AG056771 · NIA · UNIVERSITY OF WISCONSIN-MADISON · PI LAMMING, DUDLEY WILLIAM · 2023 to 2023
$2.1M
The in vivo regulation of glucose homeostasis and lifespan by mTORC2R00AG041765 · NIA · UNIVERSITY OF WISCONSIN-MADISON · PI LAMMING, DUDLEY WILLIAM · 2014 to 2016
$738k
The regulation of health and longevity by branched-chain amino acidsR56AG056771 · NIA · UNIVERSITY OF WISCONSIN-MADISON · PI LAMMING, DUDLEY WILLIAM · 2017 to 2017
$573k
Application for Administrative Supplement to Existing Award AG050135 to Develop Research on Alzheimer's DiseaseR21AG050135 · NIA · UNIVERSITY OF WISCONSIN-MADISON · PI LAMMING, DUDLEY WILLIAM, MERRINS, MATTHEW J. · 2016 to 2017
$568k
Intervention in Progeria by Alterations in dietary macronutrient CompositionR21AG051974 · NIA · UNIVERSITY OF WISCONSIN-MADISON · PI LAMMING, DUDLEY WILLIAM · 2017 to 2018
$409k
The in vivo regulation of glucose homeostasis and lifespan by mTORC2K99AG041765 · NIA · WHITEHEAD INSTITUTE FOR BIOMEDICAL RES · PI LAMMING, DUDLEY WILLIAM · 2012 to 2013
$141k
Promoting metabolic health through the reduction of dietary branched chain amino acidsI01BX004031 · VA · WM S. MIDDLETON MEMORIAL VETERANS HOSP · PI LAMMING, DUDLEY WILLIAM · 2018 to 2022
–
BLRD VA I01 BX004031NCATS NIH HHS UL1 TR002373NCI NIH HHS P30 CA014520NIA NIH HHS K99 AG041765NIA NIH HHS R00 AG041765NIA NIH HHS R01 AG056771NIA NIH HHS R21 AG050135NIA NIH HHS R21 AG051974NIA NIH HHS R56 AG056771NIA NIH HHS RF1 AG056771NIA NIH HHS T32 AG000213NIDDK NIH HHS P30 DK020579
6 · The paper itself

Abstract

Obesity and type 2 diabetes are increasing in prevalence around the world, and there is a clear need for new and effective strategies to promote metabolic health. A low protein (LP) diet improves metabolic health in both rodents and humans, but the mechanisms that underlie this effect remain unknown. The gut microbiome has recently emerged as a potent regulator of host metabolism and the response to diet. Here, we demonstrate that a LP diet significantly alters the taxonomic composition of the gut microbiome at the phylum level, altering the relative abundance of Actinobacteria, Bacteroidetes, and Firmicutes. Transcriptional profiling suggested that any impact of the microbiome on liver metabolism was likely independent of the microbiome-farnesoid X receptor (FXR) axis. We therefore tested the ability of a LP diet to improve metabolic health following antibiotic ablation of the gut microbiota. We found that a LP diet promotes leanness, increases energy expenditure, and improves glycemic control equally well in mice treated with antibiotics as in untreated control animals. Our results demonstrate that the beneficial effects of a LP diet on glucose homeostasis, energy balance, and body composition are unlikely to be mediated by diet-induced changes in the taxonomic composition of the gut microbiome.

Indexed as

BiotaMetabolismAmino AcidsAnimalsDietGene Expression ProfilingIntestinesMiceAmino Acids

Identifiers

PMID30635612
PMCPMC6329753
OpenAlexW2918900648

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.