ArticleScientific reports2019
Comparative transcriptome analysis reveals relationship of three major domesticated varieties of Auricularia auricula-judae.
Article in Scientific reports, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 19 papers.
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19 citing papers in PubMed.
- Anticancer Properties of Selected Wood-Inhabiting Fungi.Nutrients · 2026Review
- Comparative transcriptome analysis reveals putative transcription factors components of the regulatory network for cannabidiol biosynthesis inFrontiers in plant science · 2026Article
- Bactericidal Effects of Pulsed-Light Treatment AgainstFoods (Basel, Switzerland) · 2025Article
- A Review of Genomic, Transcriptomic, and Proteomic Applications in Edible Fungi Biology: Current Status and Future Directions.Journal of fungi (Basel, Switzerland) · 2025Review
- Comparative Genomic Analysis of Two Monokaryons ofJournal of fungi (Basel, Switzerland) · 2025Article
- Using Commercial Bio-Functional Fungal Polysaccharides to Construct Emulsion Systems by Associating with SPI.Foods (Basel, Switzerland) · 2025Article
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- Transcriptom Analysis ofMycobiology · 2025Article
- The Biphasic Activity of Auricularia Auricula-Judae Extract on Bone Homeostasis through Inhibition of Osteoclastogenesis and Modulation of Osteogenic Activity.Journal of microbiology and biotechnology · 2024Article
- Auricularia auricula polysaccharides attenuate obesity in mice through gut commensal Papillibacter cinnamivorans.Journal of advanced research · 2023Article
- The Current State and Future Prospects ofMolecules (Basel, Switzerland) · 2023Review
- Wild Mushrooms: A Hidden Treasure of Novel Bioactive Compounds.International journal of analytical chemistry · 2023Article
- Enhancing the Nutritional and Functional Properties ofFoods (Basel, Switzerland) · 2022Article
- Integrative proteomic and physiological analyses of the molecular response to dessication-stress inFrontiers in plant science · 2022Article
- Edible and medicinal fungi breeding techniques, a review: Current status and future prospects.Current research in food science · 2022Review
- Article
- Comparative transcriptome analyses of differentPeerJ · 2021Article
- Transcriptome analysis of twoPeerJ · 2021Article
- Evaluation of the phytoconstituents ofEuropean journal of integrative medicine · 2020Article
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11 authors.
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Abstract
Auricularia auricula-judae is an edible mushroom and a traditional medicine in China as well as the fourth largest cultivated mushroom species in the world. Here for the first time, we present comparative transcriptome analyses of the fruiting bodies of three morphologically distinguishable A. auricula-judae cultivated varieties (Wujin, smooth; Banjin, partially wrinkled; and Quanjin, fully wrinkled) collected from Jilin Province, China. Biological triplicates were performed to determine the expression levels of 13,937 unigenes. Among them, only 13 unigenes were annotated to A. auricula-judae, highlighting the lack of publicly available reference sequences for this economically important species. Principal component analysis (PCA) determined that the gene expression profile of Quanjin was unique when compared to those of Banjin and Wujin. Such relationships were further supported by analyses of annotated and unannotated unigenes, differentially expressed unigenes, gene ontology functions, and the family of peroxidase genes. Using the KEGG database, significant alternations in biological pathways were detected among the three cultivars. This work contributes a large set of A. auricula-judae sequences to public database, establishes the relationships among major cultivars, and provides molecular guidance for breeding and cultivation.
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