Evidence map›Paper›PMID 30635058›Full record

ArticleMicrobiome2019

Host-microbiota interactions: from holobiont theory to analysis.

Jean-Christophe Simon, Julian R Marchesi, Christophe Mougel, Marc-André Selosse

Abstract read
In one paragraph

Article in Microbiome, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 201 papers.

0numbers the graph read from it
0cells of the map it votes in
201citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

201 citing papers in PubMed.

  1. Article
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  12. Nutrients · 2026
    Article
  13. Article
  14. Article
  15. Article
  16. Review
  17. Article
  18. A New Classification Framework to Understand Evolutionary Transitions in Individuality.BioEssays : news and reviews in molecular, cellular and developmental biology · 2026
    Review
  19. Article
  20. Article

141 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

Jean-Christophe SimonUMR 1349, IGEPP (Institut de Génétique, Environnement et Protection des Plantes), INRA, Agrocampus Ouest, Université Rennes 1, Domaine de la Motte, 35653, Le Rheu Cedex, France. jean-christophe.simon@inra.fr.ORCID 0000-0003-0620-5835
Julian R MarchesiCentre for Digestive and Gut Health, Imperial College London, London, W2 1NY, UK.
Christophe MougelUMR 1349, IGEPP (Institut de Génétique, Environnement et Protection des Plantes), INRA, Agrocampus Ouest, Université Rennes 1, Domaine de la Motte, 35653, Le Rheu Cedex, France.
Marc-André SelosseMuséum National d'Histoire Naturelle, Institut de Systématique, Évolution, Biodiversité, ISYEB-UMR 7205-CNRS, MNHN, UPMC, EPHE, Sorbonne Universités, 57 Rue Cuvier-CP39, F-75005, Paris, France.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

In the recent years, the holobiont concept has emerged as a theoretical and experimental framework to study the interactions between hosts and their associated microbial communities in all types of ecosystems. The spread of this concept in many branches of biology results from the fairly recent realization of the ubiquitous nature of host-associated microbes and their central role in host biology, ecology, and evolution. Through this special series "Host-microbiota interactions: from holobiont theory to analysis," we wanted to promote this field of research which has considerable implications for human health, food production, and ecosystem protection. In this preface, we highlight a collection of articles selected for this special issue that show, use, or debate the concept of holobiont to approach taxonomically and ecologically diverse organisms, from humans and plants to sponges and insects. We also identify some theoretical and methodological challenges and propose directions for future research on holobionts.

Indexed as

Host Microbial InteractionsMicrobiotaAnimalsFood MicrobiologyHumansPlantsSymbiosisHolobiontHologenomeHost-microbiota interactionsMetagenomicsSymbiosis

Identifiers

PMID30635058
PMCPMC6330386

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.