Evidence map›Paper›PMID 30628653›Full record

ArticleInternational journal of molecular medicine2019

Gene networking in colistin-induced nephrotoxicity reveals an adverse outcome pathway triggered by proteotoxic stress.

Eun Hee Lee, Soojin Kim, Mi-Sun Choi, Heeyoung Yang, Se-Myo Park, Hyun-A Oh, Kyoung-Sik Moon, Ji-Seok Han, Yong-Bum Kim, Seokjoo Yoon and 1 more

Open access · bronzeAbstract read
In one paragraph

Article in International journal of molecular medicine, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
0.6field-weighted citation impact, top 43% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 16 citations in OpenAlex.

  1. Article
  2. Molecular mechanisms attributed to colistin renal proximal tubular epithelial cytotoxicity.Saudi pharmaceutical journal : SPJ : the official publication of the Saudi Pharmaceutical Society · 2025
    Review
  3. Article
  4. Article
  5. Review
  6. Article
  7. METTL3/mFrontiers in pharmacology · 2019
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 1 institution in 1 country.

Eun Hee LeeDepartment of Predictive Toxicology, Korea Institute of Toxicology, Daejeon 34114, Republic of Korea.
Soojin KimDepartment of Predictive Toxicology, Korea Institute of Toxicology, Daejeon 34114, Republic of Korea.
Mi-Sun ChoiDepartment of Predictive Toxicology, Korea Institute of Toxicology, Daejeon 34114, Republic of Korea.
Heeyoung YangDepartment of Predictive Toxicology, Korea Institute of Toxicology, Daejeon 34114, Republic of Korea.
Se-Myo ParkDepartment of Predictive Toxicology, Korea Institute of Toxicology, Daejeon 34114, Republic of Korea.
Hyun-A OhDepartment of Predictive Toxicology, Korea Institute of Toxicology, Daejeon 34114, Republic of Korea.
Kyoung-Sik MoonDepartment of Predictive Toxicology, Korea Institute of Toxicology, Daejeon 34114, Republic of Korea.
Ji-Seok HanDepartment of Predictive Toxicology, Korea Institute of Toxicology, Daejeon 34114, Republic of Korea.
Yong-Bum KimDepartment of Predictive Toxicology, Korea Institute of Toxicology, Daejeon 34114, Republic of Korea.
Seokjoo YoonDepartment of Predictive Toxicology, Korea Institute of Toxicology, Daejeon 34114, Republic of Korea.
Jung-Hwa OhDepartment of Predictive Toxicology, Korea Institute of Toxicology, Daejeon 34114, Republic of Korea.
Korea Institute of Toxicology · KR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Colistin has been widely used for the treatment of infections of multidrug‑resistant Gram‑negative bacteria, despite the fact that it induces serious kidney injury as a side effect. To investigate the mechanism underlying its nephrotoxicity, colistin methanesulfonate sodium (CMS; 25 or 50 mg/kg) was administered via intraperitoneal injection to Sprague‑Dawley rats daily over 7 days. Serum biochemistry and histopathology indicated that nephrotoxicity occurred in the rats administered with CMS. Whole‑genome microarrays indicated 894 differentially expressed genes in the group treated with CMS (analysis of variance, false discovery rate <0.05, fold‑change ≥1.3). Gene pathway and networking analyses revealed that genes associated with proteotoxic stress, including ribosome synthesis, protein translation, and protein folding, were significantly associated with the nephrotoxicity induced by CMS. It was found that colistin inhibited the expression of the target genes heat shock factor 1 and nuclear factor erythroid‑2‑related factor‑2, which are associated with proteostasis, and that nephrotoxicity of CMS may be initiated by proteotoxic stress due to heat shock response inhibition, leading to oxidative stress, endoplasmic reticulum stress, cell cycle arrest and apoptosis, eventually leading to cell death. A putative adverse outcome pathway was constructed based on the integrated gene networking data, which may clarify the mode of action of colistin‑induced nephrotoxicity.

Indexed as

Gene Regulatory NetworksAnimalsBiomarkersColistinGene Expression ProfilingKidneyMaleMetabolic Networks and PathwaysMiceOxidative StressProtein Interaction MappingProtein Interaction MapsRatsSignal TransductionStress, PhysiologicalTranscriptomeBiomarkersColistin

Identifiers

PMID30628653
PMCPMC6365082
OpenAlexW2908873632

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.