Evidence map›Paper›PMID 30627857›Full record

ArticleMikrochimica acta2019

Amplification-free and direct fluorometric determination of telomerase activity in cell lysates using chimeric DNA-templated silver nanoclusters.

Shi Ting Lee, Ruman Rahman, Kasturi Muthoosamy, Nur Aliana Hidayah Mohamed, XiaoDi Su, Saad Tayyab, Siu Yee New

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Article in Mikrochimica acta, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed.

  1. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Shi Ting LeeSchool of Pharmacy, Faculty of Science, University of Nottingham Malaysia, Jalan Broga, 43500, Semenyih, Selangor, Malaysia.
Ruman RahmanChildren's Brain Tumour Research Centre (CBTRC), School of Medicine, Queen's Medical Centre, University of Nottingham, Nottingham, NG7 2UH, UK.
Kasturi MuthoosamyNanotechnology and Advanced Materials (NATAM), Faculty of Engineering, University of Nottingham Malaysia, Jalan Broga, 43500, Semenyih, Selangor, Malaysia.
Nur Aliana Hidayah MohamedCentre of Clinical Science, Faculty of Dentistry, University of Technology MARA Sungai Buloh Campus, Jalan Hospital, 47000 Sungai Buloh, Selangor, Malaysia.
XiaoDi SuInstitute of Materials Research and Engineering, 2 Fusionopolis Way, Singapore, 138634, Singapore.
Saad TayyabInstitute of Biological Sciences, Faculty of Science, University of Malaya, 50603, Kuala Lumpur, Malaysia.
Siu Yee NewSchool of Pharmacy, Faculty of Science, University of Nottingham Malaysia, Jalan Broga, 43500, Semenyih, Selangor, Malaysia. SiuYee.New@nottingham.edu.my.ORCID http://orcid.org/0000-0003-4392-3852

Funding

Fundamental Research Grant Scheme FRGS/2/2014/SG06/UNIM/02/1
6 · The paper itself

Abstract

A fluorogenic probe has been developed for determination of telomerase activity using chimeric DNA-templated silver nanoclusters (AgNCs). The formation of AgNCs was investigated before (route A) and after (route B) telomerase elongation reaction. Both routes caused selective quenching of the yellow emission of the AgNCs (best measured at excitation/emission wavelength of 470/557 nm) in telomerase-positive samples. The quenching mechanism was studied using synthetically elongated DNA to mimic the telomerase-catalyzed elongation. The findings show that quenching is due to the formation of parallel G-quadruplexes with a -TTA- loop in the telomerase elongated products. The assay was validated using different cancer cell extracts, with intra- and interassay coefficients of variations of <9.8%. The limits of detection for MCF7, RPMI 2650 and HT29 cell lines are 15, 22 and 39 cells/μL. This represents a distinct improvement over the existing telomeric repeat amplification protocol (TRAP) assay in terms of time, sensitivity and cost. Graphical Abstract A method was developed using chimeric DNA-templated silver nanoclusters to detect telomerase activity directly in cell extracts. The sensitivity of this new method outperforms the traditional TRAP assay, and without the need for amplification.

Indexed as

Biosensing TechniquesCell LineChimeraDNAFluorescenceFluorometryHumansMetal NanoparticlesNeoplasmsSilverTelomeraseDNASilverTelomeraseAgNCsBiomarkerBiosensorCancer probeG-quadruplexHT29MCF7RPMI 2650TelomersTRAP

Identifiers

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.