ArticleInternational journal of genomics2018
Comparative Transcriptome Analysis of Temperature-Induced Green Discoloration in Garlic.
Article in International journal of genomics, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.
What it found
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Who cites it
6 citing papers in PubMed.
- Structural and functional characterization of aquaporin 4 from the freshwater gastropod Pomacea canaliculata under temperature stress.Molecular biology reports · 2026Article
- Proximate, Physicochemical, Functional and Sensory Responses of Garlic Paste Formulations CombiningFoods (Basel, Switzerland) · 2026Article
- Postharvest Quality and Storage Stability of Garlic Cultivars From a Highland Semi-Arid Region.Journal of food science · 2026Article
- Turning Garlic into a Modern Crop: State of the Art and Perspectives.Plants (Basel, Switzerland) · 2023Review
- A comprehensive review on genomic resources in medicinally and industrially important major spices for future breeding programs: Status, utility and challenges.Current research in food science · 2023Review
- Transcriptome in Combination Proteome Unveils the Phenylpropane Pathway Involved in Garlic (Frontiers in nutrition · 2021Article
Corrections and comments
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Authors and funding
7 authors.
Funding
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Abstract
Green discoloration is one of the most important problems that cause low quality of product in the processing of garlic, which can be induced by low-temperature stress. But the mechanism of low temperature-induced green discoloration is poorly understood. In the present study, the control garlic and three low temperature-treated garlic samples (stored at 4°C with 10, 15, and 40 days, respectively) were used for genome-wide transcriptome profiling analysis. A total of 49280 garlic unigenes with an average length of 1337 bp were de novo assembled, 20231 of which were achieved for functional annotation. When being suffered from 10, 15, and 40 days of low-temperature treatment, an increased degree of discoloration was observed, and a total of 4757, 4401, and 2034 unigenes showed a differential expression, respectively. Finally, 5923 differentially expressed genes (DEGs) were found to respond to the low-temperature stress, of which 3921 were identified in at least two treatments. Among these stress-responsive unigenes, there were large numbers of enzyme-encoding genes, which significantly enriched the pathway "proteasome," many genes of which are potentially involved in the garlic discoloration, such as 7 alliinase-encoding genes, 5
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Registered trials
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