Evidence map›Paper›PMID 30626941›Full record

ArticleNature2019

De novo design of potent and selective mimics of IL-2 and IL-15.

Daniel-Adriano Silva, Shawn Yu, Umut Y Ulge, Jamie B Spangler, Kevin M Jude, Carlos Labão-Almeida, Lestat R Ali, Alfredo Quijano-Rubio, Mikel Ruterbusch, Isabel Leung and 15 more

Open access · greenAbstract read
In one paragraph

Article in Nature, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 316 papers, 2 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
316citing papers in PubMed, 2 pooled it
24.7field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

316 citing papers in PubMed, 2 syntheses or guidelines pooled it, 534 citations in OpenAlex.

  1. Pooled it
  2. Pooled it
  3. Article
  4. Article
  5. De novo design of protease-activatable cytokine prodrugs.bioRxiv : the preprint server for biology · 2026
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  8. Scalable Production of aPharmaceutics · 2026
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  15. Adaptive resistance in cancer immunotherapy.Cellular & molecular immunology · 2026
    Review
  16. Review
  17. Review
  18. Review
  19. Article
  20. Covalent tumor anchoring spatially orchestrates antitumor immunity.bioRxiv : the preprint server for biology · 2026
    Article

256 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

25 authors at 7 institutions in 4 countries.

Daniel-Adriano Silva *Institute for Protein Design, University of Washington, Seattle, WA, USA. dadriano@uw.edu.
Shawn Yu *Institute for Protein Design, University of Washington, Seattle, WA, USA.
Umut Y Ulge *Institute for Protein Design, University of Washington, Seattle, WA, USA.
Jamie B Spangler *Departments of Biomedical Engineering and Chemical and Biomolecular Engineering, Johns Hopkins University, Baltimore, MD, USA.
Kevin M JudeDepartments of Molecular and Cellular Physiology and Structural Biology, Stanford University School of Medicine, Stanford, CA, USA.
Carlos Labão-AlmeidaInstituto de Medicina Molecular, Faculdade de Medicina, Universidade de Lisboa, Lisbon, Portugal.
Lestat R AliDivision of Gastroenterology, Massachusetts General Hospital, Harvard Medical School, Boston, MA, USA.
Alfredo Quijano-RubioInstitute for Protein Design, University of Washington, Seattle, WA, USA.
Mikel RuterbuschDepartment of Immunology, University of Washington School of Medicine, Seattle, WA, USA.
Isabel LeungFred Hutchinson Cancer Research Center, Clinical Research Division, Seattle, WA, USA.
Tamara BiaryDivision of Gastroenterology, Massachusetts General Hospital, Harvard Medical School, Boston, MA, USA.
Stephanie J CrowleyDivision of Gastroenterology, Massachusetts General Hospital, Harvard Medical School, Boston, MA, USA.
Enrique MarcosInstitute for Protein Design, University of Washington, Seattle, WA, USA.
Carl D WalkeyInstitute for Protein Design, University of Washington, Seattle, WA, USA.
Brian D WeitznerInstitute for Protein Design, University of Washington, Seattle, WA, USA.
Fátima Pardo-AvilaDepartment of Structural Biology, Stanford University School of Medicine, Stanford, CA, USA.
Javier CastellanosInstitute for Protein Design, University of Washington, Seattle, WA, USA.
Lauren CarterInstitute for Protein Design, University of Washington, Seattle, WA, USA.
Lance StewartInstitute for Protein Design, University of Washington, Seattle, WA, USA.
Stanley R RiddellFred Hutchinson Cancer Research Center, Clinical Research Division, Seattle, WA, USA.
Marion PepperDepartment of Immunology, University of Washington School of Medicine, Seattle, WA, USA.
Gonçalo J L BernardesInstituto de Medicina Molecular, Faculdade de Medicina, Universidade de Lisboa, Lisbon, Portugal.
Michael DouganDivision of Gastroenterology, Massachusetts General Hospital, Harvard Medical School, Boston, MA, USA.
K Christopher GarciaDepartments of Molecular and Cellular Physiology and Structural Biology, Stanford University School of Medicine, Stanford, CA, USA. kcgarcia@stanford.edu.
David BakerInstitute for Protein Design, University of Washington, Seattle, WA, USA. dabaker@uw.edu.
University of Washington · USStanford University · USFred Hutch Cancer Center · USHarvard University · USMassachusetts General Hospital · USUniversity of Cambridge · GBUniversity of Lisbon · PT

Funding

X-ray Absorption Spectroscopy (XAS) pp.711-759P41GM103393 · NIGMS · STANFORD UNIVERSITY · PI HODGSON, KEITH O · 2012 to 2019
$30.6M
University of Washington Medical Scientist Training Program: MD/PhDT32GM007266 · NIGMS · UNIVERSITY OF WASHINGTON · PI HORWITZ, MARSHALL S. · 1985 to 2023
$30.4M
Structure-based engineering of immune cytokine signalingR01AI051321 · NIAID · STANFORD UNIVERSITY · PI Kenan Christopher GARCIA · 2002 to 2026
$5.6M
Emergent Properties of Complex Systems: From Atoms to Macromolecules; from Humans to SocietiesR35GM122543 · NIGMS · STANFORD UNIVERSITY · PI MICHAEL LEVITT · 2017 to 2026
$5.1M
Structure, function and engineering of immune cytokine receptor signalingR37AI051321 · NIAID · STANFORD UNIVERSITY · PI GARCIA, KENAN CHRISTOPHER · 2013 to 2022
$4.2M
The differentiation and function of CD4+ Th2 cells during allergen-induced asthmaR01AI108626 · NIAID · UNIVERSITY OF WASHINGTON · PI PEPPER, MARION · 2014 to 2018
$2.4M
High-Speed High-Sensitivity Detector for X-ray Micro-Crystallography at GM/CA@APSS10OD012289 · OD · UNIVERSITY OF CHICAGO · PI FISCHETTI, ROBERT F. · 2014 to 2014
$2.0M
Protein-Protein InteractionsR01GM059224 · NIGMS · UNIVERSITY OF WASHINGTON · PI BAKER, DAVID · 1999 to 2009
$1.8M
Pilatus 6mS10OD021832 · OD · UNIVERSITY OF CALIFORNIA BERKELEY · PI ADAMS, PAUL DAVID · 2016 to 2016
$980k
Regulation of brown fat metabolism by the immune receptor PD-L1K08DK114563 · NIDDK · MASSACHUSETTS GENERAL HOSPITAL · PI DOUGAN, MICHAEL LAWRENCE · 2017 to 2021
$868k
Howard Hughes Medical InstituteNIAID NIH HHS R01 AI051321NIAID NIH HHS R01 AI108626NIAID NIH HHS R37 AI051321NIDDK NIH HHS K08 DK114563NIGMS NIH HHS P41 GM103393NIGMS NIH HHS R01 GM059224NIGMS NIH HHS R35 GM122543NIGMS NIH HHS T32 GM007266NIH HHS S10 OD012289NIH HHS S10 OD021832
6 · The paper itself

Abstract

We describe a de novo computational approach for designing proteins that recapitulate the binding sites of natural cytokines, but are otherwise unrelated in topology or amino acid sequence. We use this strategy to design mimics of the central immune cytokine interleukin-2 (IL-2) that bind to the IL-2 receptor βγ

Indexed as

Drug DesignMolecular MimicryAmino Acid SequenceAnimalsBinding SitesColonic NeoplasmsComputer SimulationCrystallography, X-RayDisease Models, AnimalHumansInterleukin-15Interleukin-2Interleukin-2 Receptor alpha SubunitMelanomaMiceModels, MolecularInterleukin-15Interleukin-2Interleukin-2 Receptor alpha SubunitReceptors, Interleukin-2

Identifiers

PMID30626941
PMCPMC6521699
OpenAlexW2908391177

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.