Evidence map›Paper›PMID 30626930›Full record

ArticleEuropean journal of human genetics : EJHG2019

Value of genetic analysis for confirming inborn errors of metabolism detected through the Spanish neonatal screening program.

Rosa Navarrete, Fátima Leal, Ana I Vega, Ana Morais-López, María Teresa Garcia-Silva, Elena Martín-Hernández, Pilar Quijada-Fraile, Ana Bergua, Inmaculada Vives, Inmaculada García-Jiménez and 18 more

Open access · greenAbstract read
In one paragraph

Article in European journal of human genetics : EJHG, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 21 papers.

0numbers the graph read from it
0cells of the map it votes in
21citing papers in PubMed
1.7field-weighted citation impact, top 19% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

21 citing papers in PubMed, 28 citations in OpenAlex.

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  5. Genes · 2025
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  6. NovelFrontiers in genetics · 2025
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

28 authors at 13 institutions in 1 country.

Rosa NavarreteCentro de Diagnóstico de Enfermedades Moleculares, Centro de Biología Molecular, Universidad Autónoma de Madrid, CIBERER, IdiPAZ, Madrid, Spain.
Fátima LealCentro de Diagnóstico de Enfermedades Moleculares, Centro de Biología Molecular, Universidad Autónoma de Madrid, CIBERER, IdiPAZ, Madrid, Spain.
Ana I VegaCentro de Diagnóstico de Enfermedades Moleculares, Centro de Biología Molecular, Universidad Autónoma de Madrid, CIBERER, IdiPAZ, Madrid, Spain.
Ana Morais-LópezUnidad de Nutrición Infantil y Enfermedades Metabólicas, Hospital Universitario La Paz, Madrid, Spain.
María Teresa Garcia-SilvaUnidad de Enfermedades Mitocondriales y Enfermedades Metabólicas Hereditarias, Hospital Universitario 12 de Octubre, Madrid, Spain.
Elena Martín-HernándezUnidad de Enfermedades Mitocondriales y Enfermedades Metabólicas Hereditarias, Hospital Universitario 12 de Octubre, Madrid, Spain.
Pilar Quijada-FraileUnidad de Enfermedades Mitocondriales y Enfermedades Metabólicas Hereditarias, Hospital Universitario 12 de Octubre, Madrid, Spain.
Ana BerguaUnidad de Nutrición Infantil y Enfermedades Metabólicas, Hospital Universitario La Paz, Madrid, Spain.
Inmaculada VivesDpto. de Gastroenterología y Nutrición, Hospital Universitario Virgen de la Arrixaca, Murcia, Spain.
Inmaculada García-JiménezUnidad de Enfermedades Metabólicas, Hospital Universitario Miguel Servet, Zaragoza, Spain.
Raquel YahyaouiLaboratorio de Metabolopatías, Hospital Regional Universitario, Instituto de Investigación Biomédica de Málaga, Málaga, Spain.
Consuelo Pedrón-GinerSección de Gastroenterología y Nutrición, Hospital Universitario Niño Jesús, Madrid, Spain.
Amaya Belanger-QuintanaUnidad de Enfermedades Metabólicas Congénitas, Hospital Universitario Ramón y Cajal, Madrid, Spain.
Sinziana StanescuUnidad de Enfermedades Metabólicas Congénitas, Hospital Universitario Ramón y Cajal, Madrid, Spain.
Elvira CañedoSección de Gastroenterología y Nutrición, Hospital Universitario Niño Jesús, Madrid, Spain.
Oscar García-CamposDpto, de Pediatría, Hospital Virgen de la Salud, Toledo, Spain.
María Bueno-DelgadoDpto. de Pediatría, Hospital Universitario Virgen del Rocío, Seville, Spain.
Carmen Delgado-PecellínLaboratorio de Metabolopatías, Hospital Universitario Virgen del Rocío, Seville, Spain.
Isidro VitoriaUnidad de Nutrición y Metabolopatías, Hospital Universitario La Fe, Valencia, Spain.
María Dolores RausellLaboratorio de Metabolopatías, Hospital Universitario La Fe, Valencia, Spain.
Elena BalmasedaDpto. de Pediatría, Complejo Hospitalario Universitario de Albacete, Albacete, Spain.
Mari Luz CouceUnidad de Enfermedades Metabólicas, Hospital Clínico Universitario de Santiago, Santiago de Compostela, CIBERER, Santiago, Spain.
Lourdes R DesviatCentro de Diagnóstico de Enfermedades Moleculares, Centro de Biología Molecular, Universidad Autónoma de Madrid, CIBERER, IdiPAZ, Madrid, Spain.ORCID 0000-0003-0492-3323
Begoña MerineroCentro de Diagnóstico de Enfermedades Moleculares, Centro de Biología Molecular, Universidad Autónoma de Madrid, CIBERER, IdiPAZ, Madrid, Spain.
Pilar Rodríguez-PomboCentro de Diagnóstico de Enfermedades Moleculares, Centro de Biología Molecular, Universidad Autónoma de Madrid, CIBERER, IdiPAZ, Madrid, Spain.
Magdalena UgarteCentro de Diagnóstico de Enfermedades Moleculares, Centro de Biología Molecular, Universidad Autónoma de Madrid, CIBERER, IdiPAZ, Madrid, Spain.
Celia Pérez-CerdáCentro de Diagnóstico de Enfermedades Moleculares, Centro de Biología Molecular, Universidad Autónoma de Madrid, CIBERER, IdiPAZ, Madrid, Spain.
Belén PérezCentro de Diagnóstico de Enfermedades Moleculares, Centro de Biología Molecular, Universidad Autónoma de Madrid, CIBERER, IdiPAZ, Madrid, Spain. bperez@cbm.csic.es.
Centro de Investigación Biomédica en Red · ESHospital Universitario 12 De Octubre · ESHospital Infantil Universitario Niño Jesús · ESHospital Universitari i Politècnic La Fe · ESHospital Universitario La Paz · ESHospital Universitario Ramón y Cajal · ESHospital Universitario Virgen del Rocío · ESComplejo Hospitalario Universitario de Albacete · ESComplejo Hospitalario Universitario de Santiago · ESHospital Universitario Miguel Servet · ESHospital Universitario Virgen de la Arrixaca · ESHospital Virgen de la Salud · ESInstituto de Investigación Biomédica de Málaga · ES

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The present work describes the value of genetic analysis as a confirmatory measure following the detection of suspected inborn errors of metabolism in the Spanish newborn mass spectrometry screening program. One hundred and forty-one consecutive DNA samples were analyzed by next-generation sequencing using a customized exome sequencing panel. When required, the Illumina extended clinical exome panel was used, as was Sanger sequencing or transcriptional profiling. Biochemical tests were used to confirm the results of the genetic analysis. Using the customized panel, the metabolic disease suspected in 83 newborns (59%) was confirmed. In three further cases, two monoallelic variants were detected for two genes involved in the same biochemical pathway. In the remainder, either a single variant or no variant was identified. Given the persistent absence of biochemical alterations, carrier status was assigned in 39 cases. False positives were recorded for 11. In five cases in which the biochemical pattern was persistently altered, further genetic analysis allowed the detection of two variants affecting the function of BCAT2, ACSF3, and DNAJC12, as well as a second, deep intronic variant in ETFDH or PTS. The present results suggest that genetic analysis using extended next-generation sequencing panels can be used as a confirmatory test for suspected inborn errors of metabolism detected in newborn screening programs. Biochemical tests can be very helpful when a diagnosis is unclear. In summary, simultaneous genomic and metabolomic analyses can increase the number of inborn errors of metabolism that can be confirmed following suggestive newborn screening results.

Indexed as

Genetic TestingNeonatal ScreeningExomeExome SequencingHigh-Throughput Nucleotide SequencingHumansInfant, NewbornLipid Metabolism, Inborn ErrorsMetabolism, Inborn ErrorsMutationSpain

Identifiers

PMID30626930
PMCPMC6460639
OpenAlexW2910044367

What OpenQuestion holds

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.