Evidence map›Paper›PMID 30626878›Full record

ArticleNature communications2019

A miniature multi-contrast microscope for functional imaging in freely behaving animals.

Janaka Senarathna, Hang Yu, Callie Deng, Alice L Zou, John B Issa, Darian H Hadjiabadi, Stacy Gil, Qihong Wang, Betty M Tyler, Nitish V Thakor and 1 more

Abstract read
In one paragraph

Article in Nature communications, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 52 papers.

0numbers the graph read from it
0cells of the map it votes in
52citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

52 citing papers in PubMed.

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  20. iScience · 2024
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4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

11 authors.

Janaka SenarathnaDepartment of Biomedical Engineering, Johns Hopkins University School of Medicine, Baltimore, MD, 21205, USA.
Hang YuDepartment of Biomedical Engineering, Johns Hopkins University School of Medicine, Baltimore, MD, 21205, USA.
Callie DengDepartment of Biomedical Engineering, Johns Hopkins University School of Medicine, Baltimore, MD, 21205, USA.
Alice L ZouDepartment of Biomedical Engineering, Johns Hopkins University School of Medicine, Baltimore, MD, 21205, USA.
John B IssaDepartment of Biomedical Engineering, Johns Hopkins University School of Medicine, Baltimore, MD, 21205, USA.ORCID http://orcid.org/0000-0002-9912-2854
Darian H HadjiabadiDepartment of Biomedical Engineering, Johns Hopkins University School of Medicine, Baltimore, MD, 21205, USA.
Stacy GilRussell H. Morgan Department of Radiology and Radiological Science, Johns Hopkins University School of Medicine, Baltimore, MD, 21205, USA.
Qihong WangDepartment of Biomedical Engineering, Johns Hopkins University School of Medicine, Baltimore, MD, 21205, USA.
Betty M TylerDepartment of Neurosurgery, Johns Hopkins University School of Medicine, Baltimore, MD, 21205, USA.ORCID http://orcid.org/0000-0001-9800-6969
Nitish V ThakorDepartment of Biomedical Engineering, Johns Hopkins University School of Medicine, Baltimore, MD, 21205, USA.
Arvind P PathakDepartment of Biomedical Engineering, Johns Hopkins University School of Medicine, Baltimore, MD, 21205, USA. pathak@mri.jhu.edu.

Funding

Murine Mutagenesis CoreP30NS050274 · NINDS · JOHNS HOPKINS UNIVERSITY · PI KOLODKIN, ALEX L · 2005 to 2020
$10.9M
Multiscale Image-based Modeling of Antiangiogenic Resistance in Breast CancerR01CA196701 · NCI · JOHNS HOPKINS UNIVERSITY · PI Arvind P Pathak · 2015 to 2026
$3.6M
Next-Gen Oncosurveillance: Wireless Multi-Function Microscopy of In Vivo Brain Cancer DynamicsR01CA237597 · NCI · JOHNS HOPKINS UNIVERSITY · PI Arvind P Pathak · 2020 to 2026
$2.6M
A Wireless Laser Speckle and Fluorescence Imager for In vivo Brain Tumor ImagingR21CA175784 · NCI · JOHNS HOPKINS UNIVERSITY · PI PATHAK, ARVIND P · 2013 to 2014
$380k
NCI NIH HHS R01 CA196701NCI NIH HHS R01 CA237597NCI NIH HHS R21 CA175784NIH HHS 1R01CA196701NIH HHS 1R21CA175784-01NIH HHS P30 NS050274NINDS NIH HHS P30 NS050274
6 · The paper itself

Abstract

Neurovascular coupling, cerebrovascular remodeling and hemodynamic changes are critical to brain function, and dysregulated in neuropathologies such as brain tumors. Interrogating these phenomena in freely behaving animals requires a portable microscope with multiple optical contrast mechanisms. Therefore, we developed a miniaturized microscope with: a fluorescence (FL) channel for imaging neural activity (e.g., GCaMP) or fluorescent cancer cells (e.g., 9L-GFP); an intrinsic optical signal (IOS) channel for imaging hemoglobin absorption (i.e., cerebral blood volume); and a laser speckle contrast (LSC) channel for imaging perfusion (i.e., cerebral blood flow). Following extensive validation, we demonstrate the microscope's capabilities via experiments in unanesthetized murine brains that include: (i) multi-contrast imaging of neurovascular changes following auditory stimulation; (ii) wide-area tonotopic mapping; (iii) EEG-synchronized imaging during anesthesia recovery; and (iv) microvascular connectivity mapping over the life-cycle of a brain tumor. This affordable, flexible, plug-and-play microscope heralds a new era in functional imaging of freely behaving animals.

Indexed as

MiniaturizationAnimalsBrain NeoplasmsEquipment DesignFemaleMiceMice, Inbred C57BLMice, SCIDMicroscopyMonitoring, AmbulatoryNeuroimaging

Identifiers

PMID30626878
PMCPMC6327063

What OpenQuestion holds

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LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.