Evidence map›Paper›PMID 30626009›Full record

ArticleViruses2019

A Triple Amino Acid Substitution at Position 88/94/95 in Glycoprotein GP2a of Type 1 Porcine Reproductive and Respiratory Syndrome Virus (PRRSV1) Is Responsible for Adaptation to MARC-145 Cells.

Jiexiong Xie, Ivan Trus, Dayoung Oh, Lise K Kvisgaard, Julie C F Rappe, Nicolas Ruggli, Nathalie Vanderheijden, Lars E Larsen, François Lefèvre, Hans J Nauwynck

Open access · goldAbstract read
In one paragraph

Article in Viruses, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers.

0numbers the graph read from it
0cells of the map it votes in
16citing papers in PubMed
1.8field-weighted citation impact, top 18% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

16 citing papers in PubMed, 22 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 4 institutions in 4 countries.

Jiexiong XieLaboratory of Virology, Faculty of Veterinary Medicine, Ghent University, Salisburylaan 133, B-9820 Merelbeke, Belgium. jiexiong.xie@ugent.be.ORCID 0000-0002-3374-6605
Ivan TrusLaboratory of Virology, Faculty of Veterinary Medicine, Ghent University, Salisburylaan 133, B-9820 Merelbeke, Belgium. Ivan.Trus@gmail.com.ORCID 0000-0003-2849-5140
Dayoung OhLaboratory of Virology, Faculty of Veterinary Medicine, Ghent University, Salisburylaan 133, B-9820 Merelbeke, Belgium. Dayoung.oh@ugent.be.
Lise K KvisgaardNational Veterinary Institute, Technical University of Denmark, 2800 Lyngby, Denmark. likik@vet.dtu.dk.
Julie C F RappeThe Institute of Virology and Immunology IVI, 3147 Mittelhäusern and Bern, Switzerland. julie.rappe@crick.ac.uk.
Nicolas RuggliThe Institute of Virology and Immunology IVI, 3147 Mittelhäusern and Bern, Switzerland. Nicolas.Ruggli@ivi.admin.ch.ORCID 0000-0002-7679-6290
Nathalie VanderheijdenLaboratory of Virology, Faculty of Veterinary Medicine, Ghent University, Salisburylaan 133, B-9820 Merelbeke, Belgium. Nathalie.Vanderheijden@ugent.be.
Lars E LarsenNational Veterinary Institute, Technical University of Denmark, 2800 Lyngby, Denmark. lael@vet.dtu.dk.
François LefèvreINRA, Molecular Immunology and Virology Unit, 78350 Jouy-en-Josas, France. francois.lefevre@inra.fr.
Hans J NauwynckLaboratory of Virology, Faculty of Veterinary Medicine, Ghent University, Salisburylaan 133, B-9820 Merelbeke, Belgium. hans.nauwynck@ugent.be.ORCID 0000-0001-5470-0713
Ghent University · BETechnical University of Denmark · DKUniversity of Bern · CHVirologie et Immunologie Moléculaires · FR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The Meat Animal Research Center-145 (MARC-145) cell line has been proven to be valuable for viral attenuation regarding vaccine development and production. Cell-adaptation is necessary for the efficient replication of porcine reproductive and respiratory syndrome virus (PRRSV) in these cells. Multiple sequence analysis revealed consistent amino acid substitutions in GP2a (V88F, M94I, F95L) of MARC-145 cell-adapted strains. To investigate the putative effect of these substitutions, mutations at either position 88, 94, 95, and their combinations were introduced into two PRRSV1 (13V091 and IVI-1173) infectious clones followed by the recovery of viable recombinants. When comparing the replication kinetics in MARC-145 cells, a strongly positive effect on the growth characteristics of the 13V091 strain (+2.1 log10) and the IVI-1173 strain (+1.7 log10) compared to wild-type (WT) virus was only observed upon triple amino acid substitution at positions 88 (V88F), 94 (M94I), and 95 (F95L) of GP2a, suggesting that the triple mutation is a determining factor in PRRSV1 adaptation to MARC-145 cells.

Indexed as

MutationAdaptation, PhysiologicalAmino Acid SubstitutionAnimalsCell LineGlycoproteinsMacrophages, AlveolarPorcine Reproductive and Respiratory SyndromePorcine respiratory and reproductive syndrome virusRecombination, GeneticSequence Analysis, DNASwineViral ProteinsVirus ReplicationGlycoproteinsViral Proteinsadaptation mutationGP2aMARC-145PRRSV

Identifiers

PMID30626009
PMCPMC6356402
OpenAlexW2909939605

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.