Evidence map›Paper›PMID 30625143›Full record

ArticlePLoS computational biology2019

Using the drug-protein interactome to identify anti-ageing compounds for humans.

Matías Fuentealba, Handan Melike Dönertaş, Rhianna Williams, Johnathan Labbadia, Janet M Thornton, Linda Partridge

Open access · goldAbstract read
In one paragraph

Article in PLoS computational biology, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 25 papers.

0numbers the graph read from it
0cells of the map it votes in
25citing papers in PubMed
2.5field-weighted citation impact, top 11% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

25 citing papers in PubMed, 46 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Review
  5. Review
  6. Review
  7. Pharmacology of Aging:Aging biology · 2024
    Article
  8. Review
  9. Chaperone Activators.Sub-cellular biochemistry · 2024
    Review
  10. Article
  11. Beyond sequence: Structure-based machine learning.Computational and structural biotechnology journal · 2023
    Review
  12. We are all aging, and here's why.Aging medicine (Milton (N.S.W)) · 2022
    Review
  13. Review
  14. Article
  15. Article
  16. Article
  17. Review
  18. Review
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 3 institutions in 2 countries.

Matías FuentealbaInstitute of Healthy Ageing, Department of Genetics, Evolution and Environment, University College London, London, United Kingdom.ORCID 0000-0001-7353-4394
Handan Melike DönertaşEuropean Molecular Biology Laboratory, European Bioinformatics Institute, Wellcome Genome Campus, Hinxton, Cambridge, United Kingdom.ORCID 0000-0002-9788-6535
Rhianna WilliamsInstitute of Healthy Ageing, Department of Genetics, Evolution and Environment, University College London, London, United Kingdom.
Johnathan LabbadiaInstitute of Healthy Ageing, Department of Genetics, Evolution and Environment, University College London, London, United Kingdom.ORCID 0000-0001-9625-2816
Janet M ThorntonEuropean Molecular Biology Laboratory, European Bioinformatics Institute, Wellcome Genome Campus, Hinxton, Cambridge, United Kingdom.
Linda PartridgeInstitute of Healthy Ageing, Department of Genetics, Evolution and Environment, University College London, London, United Kingdom.ORCID 0000-0001-9615-0094
European Bioinformatics Institute · GBUniversity College London · GBMax Planck Institute for Biology of Ageing · DE

Funding

Biotechnology and Biological Sciences Research Council BB/P005535/1Wellcome Trust WT098565/Z/12/Z
6 · The paper itself

Abstract

Advancing age is the dominant risk factor for most of the major killer diseases in developed countries. Hence, ameliorating the effects of ageing may prevent multiple diseases simultaneously. Drugs licensed for human use against specific diseases have proved to be effective in extending lifespan and healthspan in animal models, suggesting that there is scope for drug repurposing in humans. New bioinformatic methods to identify and prioritise potential anti-ageing compounds for humans are therefore of interest. In this study, we first used drug-protein interaction information, to rank 1,147 drugs by their likelihood of targeting ageing-related gene products in humans. Among 19 statistically significant drugs, 6 have already been shown to have pro-longevity properties in animal models (p < 0.001). Using the targets of each drug, we established their association with ageing at multiple levels of biological action including pathways, functions and protein interactions. Finally, combining all the data, we calculated a ranked list of drugs that identified tanespimycin, an inhibitor of HSP-90, as the top-ranked novel anti-ageing candidate. We experimentally validated the pro-longevity effect of tanespimycin through its HSP-90 target in Caenorhabditis elegans.

Indexed as

AgingAnimalsCaenorhabditis elegansCaenorhabditis elegans ProteinsComputational BiologyDrug DiscoveryDrug InteractionsHumansLongevityProtective AgentsProtein BindingCaenorhabditis elegans ProteinsProtective Agents

Identifiers

PMID30625143
PMCPMC6342327
OpenAlexW2894585117

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.