Evidence map›Paper›PMID 30624357›Full record

ArticleHealth physics2019

Proteomic Evaluation of the Acute Radiation Syndrome of the Gastrointestinal Tract in a Murine Total-body Irradiation Model.

Weiliang Huang, Jianshi Yu, Jace W Jones, Claire L Carter, Keely Pierzchalski, Gregory Tudor, Catherine Booth, Thomas J MacVittie, Maureen A Kane

Abstract read
In one paragraph

Article in Health physics, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
16citing papers in PubMed, 1 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

16 citing papers in PubMed, 1 synthesis or guideline pooled it.

  1. Pooled it
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  9. Dysregulated retinoic acid signaling in airway smooth muscle cells in asthma.FASEB journal : official publication of the Federation of American Societies for Experimental Biology · 2021
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors.

Weiliang HuangUniversity of Maryland, School of Pharmacy, Department of Pharmaceutical Sciences, Baltimore, MD.
Jianshi YuUniversity of Maryland, School of Pharmacy, Department of Pharmaceutical Sciences, Baltimore, MD.
Jace W JonesUniversity of Maryland, School of Pharmacy, Department of Pharmaceutical Sciences, Baltimore, MD.
Claire L CarterUniversity of Maryland, School of Pharmacy, Department of Pharmaceutical Sciences, Baltimore, MD.
Keely PierzchalskiUniversity of Maryland, School of Pharmacy, Department of Pharmaceutical Sciences, Baltimore, MD.
Gregory TudorEpistem Ltd., Manchester, UK.
Catherine BoothEpistem Ltd., Manchester, UK.
Thomas J MacVittieUniversity of Maryland, School of Medicine, Department of Radiation Oncology, Baltimore, MD.
Maureen A KaneUniversity of Maryland, School of Pharmacy, Department of Pharmaceutical Sciences, Baltimore, MD.

Funding

Graduate Training at The Chemistry Biology InterfaceT32GM066706 · NIGMS · UNIVERSITY OF MARYLAND BALTIMORE COUNTY · PI SELEY-RADTKE, KATHERINE L, SMITH, AARON T · 2004 to 2023
$3.3M
Molecular determinants of retinoid metabolism in embryonic tissuesR01HD077260 · NICHD · UNIVERSITY OF MARYLAND BALTIMORE · PI KANE, MAUREEN A, MOISE, ALEX RADU · 2014 to 2018
$1.6M
NIAID NIH HHS HHSN272201000046CNICHD NIH HHS R01 HD077260NIGMS NIH HHS T32 GM066706
6 · The paper itself

Abstract

Radiation exposure to the gastrointestinal system contributes to the acute radiation syndrome in a dose- and time-dependent manner. Molecular mechanisms that lead to the gastrointestinal acute radiation syndrome remain incompletely understood. Using a murine model of total-body irradiation, C57BL/6J male mice were irradiated at 8, 10, 12, and 14 Gy and assayed at day 1, 3, and 6 after exposure and compared to nonirradiated (sham) controls. Tryptic digests of gastrointestinal tissues (upper ileum) were analyzed by liquid chromatography-tandem mass spectrometry on a Waters nanoLC coupled to a Thermo Scientific Q Exactive hybrid quadrupole-orbitrap mass spectrometer. Pathway and gene ontology analysis were performed with Qiagen Ingenuity, Panther GO, and DAVID databases. A number of trends were identified in our proteomic data including pronounced protein changes as well as protein changes that were consistently up regulated or down regulated at all time points and dose levels interrogated. Time- and dose-dependent protein changes, canonical pathways affected by irradiation, and changes in proteins that serve as upstream regulators were also identified. Additionally, proteins involved in key processes including inflammation, radiation, and retinoic acid signaling were identified. The proteomic profiling conducted here represents an untargeted systems biology approach to identify acute molecular events that will be useful for a greater understanding of animal models and may be potentially useful toward the development of medical countermeasures and/or biomarkers.

Indexed as

ProteomicsAcute Radiation SyndromeAnimalsBiomarkersChromatography, LiquidDose-Response Relationship, RadiationGastrointestinal TractIleumMaleMiceMice, Inbred C57BLRadiation Injuries, ExperimentalTandem Mass SpectrometryWhole-Body IrradiationBiomarkers

Identifiers

PMID30624357
PMCPMC6384135

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.