Evidence map›Paper›PMID 30624047›Full record

ArticleAnalytical chemistry2019

Simultaneous Single-Channel Multiplexing and Quantification of Carbapenem-Resistant Genes Using Multidimensional Standard Curves.

Jesus Rodriguez-Manzano, Ahmad Moniri, Kenny Malpartida-Cardenas, Jyothsna Dronavalli, Frances Davies, Alison Holmes, Pantelis Georgiou

Abstract read
In one paragraph

Article in Analytical chemistry, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Jesus Rodriguez-ManzanoCentre for Bio-Inspired Technology, Department of Electrical and Electronic Engineering , Imperial College London , London , SW7 2AZ , United Kingdom.
Ahmad MoniriCentre for Bio-Inspired Technology, Department of Electrical and Electronic Engineering , Imperial College London , London , SW7 2AZ , United Kingdom.
Kenny Malpartida-CardenasCentre for Bio-Inspired Technology, Department of Electrical and Electronic Engineering , Imperial College London , London , SW7 2AZ , United Kingdom.ORCID 0000-0002-3874-8810
Jyothsna DronavalliImperial College Healthcare NHS Trust , St. Mary's Hospital , Praed Street , London , W2 1NY , United Kingdom.
Frances DaviesImperial College Healthcare NHS Trust , St. Mary's Hospital , Praed Street , London , W2 1NY , United Kingdom.
Alison HolmesNational Institute for Health Research Health Protection Research Unit in Healthcare Associated Infections and Antimicrobial Resistance , Imperial College London , Hammersmith Campus, W12 0NN , London , United Kingdom.
Pantelis GeorgiouCentre for Bio-Inspired Technology, Department of Electrical and Electronic Engineering , Imperial College London , London , SW7 2AZ , United Kingdom.

Funding

Medical Research Council MR/T005254/1Wellcome Trust
6 · The paper itself

Abstract

Multiplexing and quantification of nucleic acids, both have, in their own right, significant and extensive use in biomedical related fields. Currently, the ability to detect several nucleic acid targets in a single-reaction scales linearly with the number of targets; an expensive and time-consuming feat. Here, we propose a new methodology based on multidimensional standard curves that extends the use of real-time PCR data obtained by common qPCR instruments. By applying this novel methodology, we achieve simultaneous single-channel multiplexing and enhanced quantification of multiple targets using only real-time amplification data. This is obtained without the need of fluorescent probes, agarose gels, melting curves or sequencing analysis. Given the importance and demand for tackling challenges in antimicrobial resistance, the proposed method is applied to four of the most prominent carbapenem-resistant genes: bla

Indexed as

Anti-Bacterial AgentsCarbapenemsDNA, BacterialDrug Resistance, BacterialEnterobacteriaceaeEscherichia coliKlebsiella pneumoniaeMicrobial Sensitivity TestsNucleic AcidsReal-Time Polymerase Chain ReactionAnti-Bacterial AgentsCarbapenemsDNA, BacterialNucleic Acids

Identifiers

PMID30624047
PMCPMC6389101

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.