Evidence map›Paper›PMID 30623080›Full record

ArticleHealth science reports2018

Comparison of the nasopharynx microbiome between influenza and non-influenza cases of severe acute respiratory infections: A pilot study.

Luiz Gustavo Dos Anjos Borges, Adriana Giongo, Leandro de Mattos Pereira, Fernanda J Trindade, Tatiana Schäffer Gregianini, Fabrício Souza Campos, Elodie Ghedin, Ana Beatriz Gorini da Veiga

Open access · goldAbstract read
In one paragraph

Article in Health science reports, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 18 papers, 3 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
18citing papers in PubMed, 3 pooled it
2.8field-weighted citation impact, top 10% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

18 citing papers in PubMed, 3 syntheses or guidelines pooled it, 32 citations in OpenAlex.

  1. Pooled it
  2. Pooled it
  3. Pooled it
  4. Article
  5. Article
  6. A Review on the Nasal Microbiome and Various Disease Conditions for Newer Approaches to Treatments.Indian journal of otolaryngology and head and neck surgery : official publication of the Association of Otolaryngologists of India · 2023
    Article
  7. Article
  8. Article
  9. Article
  10. Article
  11. Review
  12. Investigation of Nasal/Oropharyngeal Microbial Community of COVID-19 Patients by 16S rDNA Sequencing.International journal of environmental research and public health · 2021
    Article
  13. Article
  14. Review
  15. Article
  16. Review
  17. Article
  18. The Microbiome of the Nose-Friend or Foe?Allergy & rhinology (Providence, R.I.)
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 5 institutions in 2 countries.

Luiz Gustavo Dos Anjos BorgesLaboratório de Biologia Molecular, Programa de Pós-Graduação em Patologia Universidade Federal de Ciências da Saúde de Porto Alegre (UFCSPA) Porto Alegre RS Brazil.
Adriana GiongoInstituto do Petróleo e dos Recursos Naturais (IPR) Pontifícia Universidade Católica do Rio Grande do Sul (PUCRS) Porto Alegre RS Brazil.
Leandro de Mattos PereiraFaculdade de Biociências Pontifícia Universidade Católica do Rio Grande do Sul (PUCRS) Porto Alegre RS Brazil.
Fernanda J TrindadeFaculdade de Biociências Pontifícia Universidade Católica do Rio Grande do Sul (PUCRS) Porto Alegre RS Brazil.
Tatiana Schäffer GregianiniLaboratório Central de Saúde Pública da Secretaria de Saúde do Estado do Rio Grande do Sul (LACEN/SES-RS) Porto Alegre RS Brazil.
Fabrício Souza CamposCollege of Veterinary Medicine and Agronomy University of Brasília, Darcy Ribeiro University Campus, ICC Asa Norte, CEP 70.910-970 Brasília DF Brazil.
Elodie GhedinCenter for Genomics and Systems Biology, Department of Biology New York University New York NY USA.
Ana Beatriz Gorini da VeigaLaboratório de Biologia Molecular, Programa de Pós-Graduação em Patologia Universidade Federal de Ciências da Saúde de Porto Alegre (UFCSPA) Porto Alegre RS Brazil.ORCID 0000-0003-1462-5506
Pontifícia Universidade Católica do Rio Grande do Sul · BRUniversidade Federal de Ciências da Saúde de Porto Alegre · BRSecretaria da Saúde · BRUniversidade de Brasília · BRYork University · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

aimsInfluenza A virus (IAV) can cause severe acute respiratory infection (SARI), and disease outcome may be associated with changes in the microbiome of the nasopharynx. This is a pilot study to characterize the microbiome of the nasopharynx in patients hospitalized with SARI, infected and not infected by IAV. METHODS AND

resultsUsing target sequencing of the 16S rRNA gene, we assessed the bacterial community of nasopharyngeal aspirate samples and compared the microbiome of patients infected with IAV with the microbiome of patients who were negative for IAV. We observed differences in the relative abundance of Proteobacteria and Firmicutes between SARI patients, with

conclusion

Indexed as

coinfectioninfluenza A virusmicrobiomerespiratory diseasesevere acute respiratory infectionupper respiratory tract

Identifiers

PMID30623080
PMCPMC6266421
OpenAlexW2800303837

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.