Evidence map›Paper›PMID 30622144›Full record

ArticleBlood advances2019

Fluorescent labeling of CRISPR/Cas9 RNP for gene knockout in HSPCs and iPSCs reveals an essential role for GADD45b in stress response.

Masoud Nasri, Perihan Mir, Benjamin Dannenmann, Diana Amend, Tessa Skroblyn, Yun Xu, Klaus Schulze-Osthoff, Maksim Klimiankou, Karl Welte, Julia Skokowa

Open access · goldAbstract read
In one paragraph

Article in Blood advances, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
1.4field-weighted citation impact, top 19% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed, 25 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Article
  6. Enrichment strategies to enhance genome editing.Journal of biomedical science · 2023
    Review
  7. Article
  8. Prostaglandin EStem cell reviews and reports · 2021
    Article
  9. Article
  10. Article
  11. CRISPR/Cas9-mediatedHaematologica · 2020
    Article
  12. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 3 institutions in 1 country.

Masoud NasriDepartment of Oncology, Hematology, Immunology, Rheumatology, and Pulmonology, University Hospital Tübingen, Tübingen, Germany.
Perihan MirDepartment of Oncology, Hematology, Immunology, Rheumatology, and Pulmonology, University Hospital Tübingen, Tübingen, Germany.
Benjamin DannenmannDepartment of Oncology, Hematology, Immunology, Rheumatology, and Pulmonology, University Hospital Tübingen, Tübingen, Germany.
Diana AmendDepartment of Oncology, Hematology, Immunology, Rheumatology, and Pulmonology, University Hospital Tübingen, Tübingen, Germany.
Tessa SkroblynDepartment of Oncology, Hematology, Immunology, Rheumatology, and Pulmonology, University Hospital Tübingen, Tübingen, Germany.
Yun XuDepartment of Oncology, Hematology, Immunology, Rheumatology, and Pulmonology, University Hospital Tübingen, Tübingen, Germany.
Klaus Schulze-OsthoffGerman Cancer Research Center, Heidelberg, Germany.
Maksim KlimiankouDepartment of Oncology, Hematology, Immunology, Rheumatology, and Pulmonology, University Hospital Tübingen, Tübingen, Germany.
Karl WelteDepartment of Oncology, Hematology, Immunology, Rheumatology, and Pulmonology, University Hospital Tübingen, Tübingen, Germany.
Julia SkokowaDepartment of Oncology, Hematology, Immunology, Rheumatology, and Pulmonology, University Hospital Tübingen, Tübingen, Germany.
University Children's Hospital Tübingen · DEHeidelberg University · DEUniversity of Tübingen · DE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

CRISPR/Cas9-mediated gene editing of stem cells and primary cell types has several limitations for clinical applications. The direct delivery of ribonucleoprotein (RNP) complexes consisting of Cas9 nuclease and guide RNA (gRNA) has improved DNA- and virus-free gene modifications, but it does not enable the essential enrichment of the gene-edited cells. Here, we established a protocol for the fluorescent labeling and delivery of CRISPR/Cas9-gRNA RNP in primary human hematopoietic stem and progenitor cells (HSPCs) and induced pluripotent stem cells (iPSCs). As a proof of principle for genes with low-abundance transcripts and context-dependent inducible expression, we successfully deleted growth arrest and DNA-damage-inducible β (

Indexed as

CRISPR-Cas SystemsGene Knockout TechniquesAntigens, DifferentiationCell LineDNA DamageGADD45 ProteinsGene EditingGene TargetingHematopoietic Stem CellsHumansInduced Pluripotent Stem CellsMacromolecular SubstancesProtein BindingRibonucleoproteinsRNA, Guide, CRISPR-Cas SystemsStress, PhysiologicalAntigens, DifferentiationGADD45B protein, humanGADD45 ProteinsMacromolecular SubstancesRibonucleoproteinsRNA, Guide, CRISPR-Cas Systems

Identifiers

PMID30622144
PMCPMC6325296
OpenAlexW2910650038

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.