Evidence map›Paper›PMID 30621727›Full record

ArticleVirology journal2019

Drug resistance evolution in patients with human immunodeficiency virus-1 under long-term antiretroviral treatment-failure in Yunnan Province, China.

Jianjian Li, Yawen Xu, Jiafa Liu, Bihui Yang, Cuixian Yang, Mi Zhang, Xingqi Dong

Open access · goldAbstract read
In one paragraph

Article in Virology journal, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
1.6field-weighted citation impact, top 18% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 11 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 1 country.

Jianjian LiYunnan Provincial Hospital of Infectious Disease, AIDS Care Center (YNACC), Kunming Medical University affiliated Infectious diseases hospital, 28 Shian Road, Taiping District, Kunming, 650301, China.
Yawen XuYunnan Provincial Hospital of Infectious Disease, AIDS Care Center (YNACC), Kunming Medical University affiliated Infectious diseases hospital, 28 Shian Road, Taiping District, Kunming, 650301, China.
Jiafa LiuYunnan Provincial Hospital of Infectious Disease, AIDS Care Center (YNACC), Kunming Medical University affiliated Infectious diseases hospital, 28 Shian Road, Taiping District, Kunming, 650301, China.
Bihui YangYunnan Provincial Hospital of Infectious Disease, AIDS Care Center (YNACC), Kunming Medical University affiliated Infectious diseases hospital, 28 Shian Road, Taiping District, Kunming, 650301, China.
Cuixian YangYunnan Provincial Hospital of Infectious Disease, AIDS Care Center (YNACC), Kunming Medical University affiliated Infectious diseases hospital, 28 Shian Road, Taiping District, Kunming, 650301, China.
Mi ZhangYunnan Provincial Hospital of Infectious Disease, AIDS Care Center (YNACC), Kunming Medical University affiliated Infectious diseases hospital, 28 Shian Road, Taiping District, Kunming, 650301, China. ynacczm@126.com.
Xingqi DongYunnan Provincial Hospital of Infectious Disease, AIDS Care Center (YNACC), Kunming Medical University affiliated Infectious diseases hospital, 28 Shian Road, Taiping District, Kunming, 650301, China. ynaccdxq@126.com.
Kunming Medical University · CNYunnan Provincial Infectious Disease Hospital · CN

Funding

Applied Basic Research Programs of Science and Technology Department of Yunnan Province 2013FZ217Key new product development project of Yunnan science and technology 2016BC005the Programs of research institutions within Yunnan medical and health Department 2017NS124
6 · The paper itself

Abstract

backgroundUnderstanding the prevalence and evolution of HIV-1 drug resistance (DR) and associated mutation patterns is critical to implementing free antiretroviral therapy in Yunnan, the first antiretroviral treatment location in China. Here We provide a basis for understanding the occurrence and development of HIV-1 resistance in Yunnan and a theoretical foundational for strategy to delay HIV-1 drug resistance and achieve successful individualized treatment.

methodsPlasma samples from different cities/prefectures were collected at Yunnan Provincial Hospital of Infectious Disease from January 2010 to September 2016, and those from drug-resistant individuals were genotyped using in-house assays, 88 patients were selected for the study who had been on treatment for ≥6 months (and for whom drug resistance was then measured), and each patient had at least 3 genotype resistance tests and who were enrolled to analyze mutation and evolution of HIV resistance.

results264 Pol sequences of 88 patients were obtained. Drug resistance levels to eight drugs increased to varying degrees with prolonged treatment. Resistance to efavirenz (EFV) and etravirine (ETR) showed the highest change, comparisons of resistant changes to second and first and to third and second agents showed altered level of drug resistance were 25 and 20 cases, 28 and 18 cases, respectively. The smallest change was Lopinavir/Ritonavir (LPV/r) present 2 and 3 cases; Resistance to lamivudine (3TC) and lopinavir/ritonavir (LPV/r) was high among patients detected thrice, whereas other drugs were distributed in all resistance levels. M184 V/I (26.14%), T69S (11.36%), and T215Y/I (10.23%) mutations were the most common in nucleoside reverse transcriptase inhibitors (NRTIs), and K103 N/R/S (21.59%), V179D/E (20.45%) in Non-NRTIs (NNRTIs). Furthermore, L10 V/F/I (6.82%), A71V (4.55%), and I54V (4.55%) mutations were common in protease inhibitors (PIs).

conclusionsWe found dynamic genotypic changes in HIV-1 drug-resistance in Yunnan, with prolonged treatment, and drug resistance was inevitable. However, resistance to different drugs occurred at varying times, and mutation site emergence was the main cause. These findings enhance our understanding of evolution and regulation, and are valuable for developing HIV-1 DR prevention strategies in Yunnan.

Indexed as

Evolution, MolecularTreatment FailureAdolescentAdultAnti-HIV AgentsAntiretroviral Therapy, Highly ActiveChildChinaDrug Resistance, ViralFemaleGenotypeHIV-1HIV InfectionsHumansLamivudineMaleAnti-HIV AgentsLamivudineRNA, ViralAIDSAntiretroviral therapeutic failureEvolutionGenotyping drug resistanceHIV-1

Identifiers

PMID30621727
PMCPMC6325746
OpenAlexW2917028418

What OpenQuestion holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.