Evidence map›Paper›PMID 30621612›Full record

ArticleBMC cancer2019

Single nucleotide polymorphism in the 3' untranslated region of LPP is a risk factor for lung cancer: a case-control study.

Shouchun Yan, Rong Sun, Shan Wu, Tianbo Jin, Shanshan Zhang, Fanglin Niu, Jingjie Li, Mingwei Chen

Open access · goldAbstract read
In one paragraph

Article in BMC cancer, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed, 1 pooled it
0.5field-weighted citation impact, top 36% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 1 synthesis or guideline pooled it, 11 citations in OpenAlex.

  1. Relationship betweenBMJ open · 2019
    Pooled it
  2. Article
  3. Review
  4. Article
  5. Article
  6. Polymorphisms of theFrontiers in immunology · 2021
    Article
  7. Genetic polymorphisms inCancer management and research · 2019
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 4 institutions in 1 country.

Shouchun YanDepartment of Respiratory Medicine, The First Affiliated Hospital of School of Medicine of Xi'an Jiaotong University, Xi'an, 710061, Shaanxi, China.
Rong SunDepartment of Emergency Medicine, Xi'an GaoXin Hospital, Xi'an, 710075, Shaanxi, China.
Shan WuDepartment of Respiratory Medicine, Xi'an No.1 hospital (Gaoling District), Xi'an, 710299, Shaanxi, China.
Tianbo JinKey Laboratory of Resource Biology and Biotechnology in Western China (Northwest University), Ministry of Education, Xi'an, 710069, Shaanxi, China.
Shanshan ZhangKey Laboratory of Resource Biology and Biotechnology in Western China (Northwest University), Ministry of Education, Xi'an, 710069, Shaanxi, China.
Fanglin NiuKey Laboratory of Resource Biology and Biotechnology in Western China (Northwest University), Ministry of Education, Xi'an, 710069, Shaanxi, China.
Jingjie LiKey Laboratory of Resource Biology and Biotechnology in Western China (Northwest University), Ministry of Education, Xi'an, 710069, Shaanxi, China.
Mingwei ChenDepartment of Respiratory Medicine, The First Affiliated Hospital of School of Medicine of Xi'an Jiaotong University, Xi'an, 710061, Shaanxi, China. chen_mingwei1964@163.com.
Ministry of Education of the People's Republic of China · CNFirst Affiliated Hospital of Xi'an Jiaotong University · CNNorthwest University · CNXi'an Chest Hospital · CN

Funding

Health Scientific Research Project of Shaanxi Province 2014D47
6 · The paper itself

Abstract

backgroundSingle nucleotide polymorphisms (SNPs) in 3'-untranslated region (UTR) of genes related with cell-matrix adhesions and migration might affect miRNA binding and potentially affect the risk of cancer. The present study aimed to screen SNPs in 3' UTR of cancer-related genes and investigate their contribution to the susceptibility of lung cancer.

methodsSeven SNPs were selected and genotyped in a case-control study (322 lung cancer patients and 384 controls) among Chinese Han population. Odds ratio (OR) and 95% confidence intervals (CIs) were calculated by logistic regression adjusted for age and gender in multiple genetic models.

resultsIn stratified analyses by gender, three (rs1064607, rs3796283 and rs2378456) of LPP gene were associated with a significantly increased susceptibility for lung cancer among male population. Besides, LPP rs2378456 weakened lung cancer risk in female. LPP rs1064607 polymorphism was significantly correlated with increased risk of lung adenocarcinoma. Furthermore, AA genotype of TNS3 rs9876 polymorphism was associated with lymphatic metastasis.

conclusionOur results provides evidence for the impact of LPP polymorphisms on the susceptibility to lung cancer in Chinese population.

Indexed as

Genetic Predisposition to Disease3' Untranslated RegionsAdultAgedCell MovementChinaCytoskeletal ProteinsFemaleGenetic Association StudiesGenotypeHumansLIM Domain ProteinsLung NeoplasmsLymphatic MetastasisMaleMicroRNAs3' Untranslated RegionsCytoskeletal ProteinsLIM Domain ProteinsLPP protein, humanMicroRNAsGenetic susceptibilityLPPLung cancerPolymorphism

Identifiers

PMID30621612
PMCPMC6325744
OpenAlexW2947164602

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.