Evidence map›Paper›PMID 30620338›Full record

ArticleThe Journal of clinical investigation2019

DEGS1-associated aberrant sphingolipid metabolism impairs nervous system function in humans.

Gergely Karsai, Florian Kraft, Natja Haag, G Christoph Korenke, Benjamin Hänisch, Alaa Othman, Saranya Suriyanarayanan, Regula Steiner, Cordula Knopp, Michael Mull and 7 more

Open access · bronzeAbstract read
In one paragraph

Article in The Journal of clinical investigation, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 54 papers.

0numbers the graph read from it
0cells of the map it votes in
54citing papers in PubMed
3.9field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

54 citing papers in PubMed, 128 citations in OpenAlex.

  1. Article
  2. Article
  3. Dyslipidemia is a metabolic hallmark of acute pain in sickle cell disease.medRxiv : the preprint server for health sciences · 2026
    Article
  4. Intracranial calcifications in DEGS1-Related Leukodystrophy: a potentially under-recognised neuroimaging feature.Neurological sciences : official journal of the Italian Neurological Society and of the Italian Society of Clinical Neurophysiology · 2026
    Article
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  18. Review
  19. Human genetic defects of sphingolipid synthesis.Journal of inherited metabolic disease · 2025
    Review
  20. Deletion Testing of theHuman mutation · 2025
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

17 authors at 4 institutions in 2 countries.

Gergely KarsaiCenter for Integrative Human Physiology, University of Zürich, Zürich, Switzerland.
Florian KraftInstitute of Human Genetics, Medical Faculty, RWTH Aachen University, Aachen, Germany.
Natja HaagInstitute of Human Genetics, Medical Faculty, RWTH Aachen University, Aachen, Germany.
G Christoph KorenkeClinic for Neuropediatrics and Congenital Metabolic Diseases, University Clinic for Paediatrics and Adolescent Medicine, Oldenburg, Germany.
Benjamin HänischInstitute of Human Genetics, Medical Faculty, RWTH Aachen University, Aachen, Germany.
Alaa OthmanCenter for Integrative Human Physiology, University of Zürich, Zürich, Switzerland.
Saranya SuriyanarayananCenter for Integrative Human Physiology, University of Zürich, Zürich, Switzerland.
Regula SteinerCenter for Integrative Human Physiology, University of Zürich, Zürich, Switzerland.
Cordula KnoppInstitute of Human Genetics, Medical Faculty, RWTH Aachen University, Aachen, Germany.
Michael MullDepartment of Diagnostic and Interventional Neuroradiology, Medical Faculty, RWTH Aachen University, Aachen, Germany.
Markus BergmannInstitute for Neuropathology, Hospital Bremen-Mitte, Bremen, Germany.
J Michael SchröderInstitute of Neuropathology, Medical Faculty, RWTH Aachen University, Aachen, Germany.
Joachim WeisInstitute of Neuropathology, Medical Faculty, RWTH Aachen University, Aachen, Germany.
Miriam ElbrachtInstitute of Human Genetics, Medical Faculty, RWTH Aachen University, Aachen, Germany.
Matthias BegemannInstitute of Human Genetics, Medical Faculty, RWTH Aachen University, Aachen, Germany.
Thorsten HornemannCenter for Integrative Human Physiology, University of Zürich, Zürich, Switzerland.
Ingo KurthInstitute of Human Genetics, Medical Faculty, RWTH Aachen University, Aachen, Germany.
RWTH Aachen University · DEUniversity of Zurich · CHKlinikum Bremen-Mitte · DEUniversity Hospital Leipzig · DE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundSphingolipids are important components of cellular membranes and functionally associated with fundamental processes such as cell differentiation, neuronal signaling, and myelin sheath formation. Defects in the synthesis or degradation of sphingolipids leads to various neurological pathologies; however, the entire spectrum of sphingolipid metabolism disorders remains elusive.

methodsA combined approach of genomics and lipidomics was applied to identify and characterize a human sphingolipid metabolism disorder.

resultsBy whole-exome sequencing in a patient with a multisystem neurological disorder of both the central and peripheral nervous systems, we identified a homozygous p.Ala280Val variant in DEGS1, which catalyzes the last step in the ceramide synthesis pathway. The blood sphingolipid profile in the patient showed a significant increase in dihydro sphingolipid species that was further recapitulated in patient-derived fibroblasts, in CRISPR/Cas9-derived DEGS1-knockout cells, and by pharmacological inhibition of DEGS1. The enzymatic activity in patient fibroblasts was reduced by 80% compared with wild-type cells, which was in line with a reduced expression of mutant DEGS1 protein. Moreover, an atypical and potentially neurotoxic sphingosine isomer was identified in patient plasma and in cells expressing mutant DEGS1.

conclusionWe report DEGS1 dysfunction as the cause of a sphingolipid disorder with hypomyelination and degeneration of both the central and peripheral nervous systems.

trial registrationNot applicable.

fundingSeventh Framework Program of the European Commission, Swiss National Foundation, Rare Disease Initiative Zurich.

Indexed as

Central Nervous System DiseasesFatty Acid DesaturasesLipid Metabolism, Inborn ErrorsMutation, MissenseSphingosineAmino Acid SubstitutionCell LineExome SequencingFemaleHumansMaleDEGS1 protein, humanFatty Acid DesaturasesSphingosineDemyelinating disordersGeneticsMetabolismMonogenic diseasesNeurological disorders

Identifiers

PMID30620338
PMCPMC6391115
OpenAlexW2909736472

What OpenQuestion holds

Textmetadata
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.