Evidence map›Paper›PMID 30620265›Full record

ArticleMicrobiology (Reading, England)2019

Reciprocal control of motility and biofilm formation by the PdhS2 two-component sensor kinase of Agrobacterium tumefaciens.

Jason E Heindl, Daniel Crosby, Sukhdev Brar, John F Pinto, Tiyan Singletary, Daniel Merenich, Justin L Eagan, Aaron M Buechlein, Eric L Bruger, Christopher M Waters and 1 more

Open access · hybridAbstract read
In one paragraph

Article in Microbiology (Reading, England), 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
2.5field-weighted citation impact, top 11% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 14 citations in OpenAlex.

  1. Article
  2. Article
  3. Loss of the Rhodobacter capsulatus Serine Acetyl Transferase Gene,Applied and environmental microbiology · 2022
    Article
  4. Article
  5. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 3 institutions in 1 country.

Jason E Heindl1​Department of Biology, Indiana University, Bloomington, IN 47405, USA.
Daniel Crosby2​Department of Biological Sciences, University of the Sciences in Philadelphia, Philadelphia, PA 19104, USA.
Sukhdev Brar2​Department of Biological Sciences, University of the Sciences in Philadelphia, Philadelphia, PA 19104, USA.
John F Pinto2​Department of Biological Sciences, University of the Sciences in Philadelphia, Philadelphia, PA 19104, USA.
Tiyan Singletary2​Department of Biological Sciences, University of the Sciences in Philadelphia, Philadelphia, PA 19104, USA.
Daniel Merenich2​Department of Biological Sciences, University of the Sciences in Philadelphia, Philadelphia, PA 19104, USA.
Justin L Eagan1​Department of Biology, Indiana University, Bloomington, IN 47405, USA.
Aaron M Buechlein3​Center for Genomics and Bioinformatics, Indiana University, Bloomington, IN 47405, USA.
Eric L Bruger4​Department of Microbiology and Molecular Genetics, Michigan State University, East Lansing, MI 48824, USA.
Christopher M Waters4​Department of Microbiology and Molecular Genetics, Michigan State University, East Lansing, MI 48824, USA.
Clay Fuqua1​Department of Biology, Indiana University, Bloomington, IN 47405, USA.
University of the Sciences · USIndiana University Bloomington · USMichigan State University · US

Funding

From structure to systems: Understanding cyclic di-GMP control of transcriptionR01GM109259 · NIGMS · MICHIGAN STATE UNIVERSITY · PI WATERS, CHRISTOPHER M · 2015 to 2019
$2.0M
Biosynthesis and regulation of a unipolar polysaccharide in AgrobacteriumR01GM120337 · NIGMS · TRUSTEES OF INDIANA UNIVERSITY · PI FUQUA, WILLIAM C · 2017 to 2020
$1.4M
Synthesis and function of a unipolar expolysaccharide in AgrobacteriumR01GM080546 · NIGMS · TRUSTEES OF INDIANA UNIVERSITY · PI FUQUA, WILLIAM C · 2007 to 2011
$1.3M
Developing novel technologies to address fundamental questions about second messenger signalingR03AI130554 · NIAID · MICHIGAN STATE UNIVERSITY · PI WATERS, CHRISTOPHER M · 2017 to 2018
$144k
Developmental Asymmetry in Agrobacterium tumefaciensF32GM100601 · NIGMS · TRUSTEES OF INDIANA UNIVERSITY · PI HEINDL, JASON EUGENE · 2012 to 2014
$135k
NIAID NIH HHS R03 AI130554NIGMS NIH HHS F32 GM100601NIGMS NIH HHS R01 GM080546NIGMS NIH HHS R01 GM109259NIGMS NIH HHS R01 GM120337
6 · The paper itself

Abstract

A core regulatory pathway that directs developmental transitions and cellular asymmetries in Agrobacterium tumefaciens involves two overlapping, integrated phosphorelays. One of these phosphorelays putatively includes four histidine sensor kinase homologues, DivJ, PleC, PdhS1 and PdhS2, and two response regulators, DivK and PleD. In several different alphaproteobacteria, this pathway influences a conserved downstream phosphorelay that ultimately controls the phosphorylation state of the CtrA master response regulator. The PdhS2 sensor kinase reciprocally regulates biofilm formation and swimming motility. In the current study, the mechanisms by which the A. tumefaciens sensor kinase PdhS2 directs this regulation are delineated. PdhS2 lacking a key residue implicated in phosphatase activity is markedly deficient in proper control of attachment and motility phenotypes, whereas a kinase-deficient PdhS2 mutant is only modestly affected. A genetic interaction between DivK and PdhS2 is revealed, unmasking one of several connections between PdhS2-dependent phenotypes and transcriptional control by CtrA. Epistasis experiments suggest that PdhS2 may function independently of the CckA sensor kinase, the cognate sensor kinase for CtrA, which is inhibited by DivK. Global expression analysis of the pdhS2 mutant reveals a restricted regulon, most likely functioning through CtrA to separately control motility and regulate the levels of the intracellular signal cyclic diguanylate monophosphate (cdGMP), thereby affecting the production of adhesive polysaccharides and attachment. We hypothesize that in A. tumefaciens the CtrA regulatory circuit has expanded to include additional inputs through the addition of PdhS-type sensor kinases, likely fine-tuning the response of this organism to the soil microenvironment.

Indexed as

LocomotionAgrobacterium tumefaciensBacterial AdhesionBacterial ProteinsBiofilmsCyclic GMPEpistasis, GeneticGene Expression Regulation, BacterialHistidine KinaseMutationPhosphorylationPolysaccharides, BacterialSignal TransductionTranscription FactorsBacterial Proteinsbis(3',5')-cyclic diguanylic acidCyclic GMPHistidine KinasePolysaccharides, BacterialTranscription FactorsAgrobacterium tumefaciensbiofilmdevelopmentmotilityphosphorelaysensor kinase

Identifiers

PMID30620265
PMCPMC7003649
OpenAlexW2950268398

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.