Evidence map›Paper›PMID 30619287›Full record

ArticleFrontiers in immunology2018

Spatial Mapping of Myeloid Cells and Macrophages by Multiplexed Tissue Staining.

Joshua Saylor, Zhaoxuan Ma, Helen S Goodridge, Fangjin Huang, Anne E Cress, Stephen J Pandol, Stephen L Shiao, Adriana C Vidal, Lily Wu, Nicholas G Nickols and 2 more

Abstract read
In one paragraph

Article in Frontiers in immunology, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 25 papers.

0numbers the graph read from it
0cells of the map it votes in
25citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

25 citing papers in PubMed.

  1. Review
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  17. Frontiers in immunology · 2021
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors.

Joshua SaylorDepartments of Biomedical Sciences, Pathology, Surgery and Medicine, Cedars-Sinai Medical Center, Los Angeles, CA, United States.
Zhaoxuan MaDepartments of Biomedical Sciences, Pathology, Surgery and Medicine, Cedars-Sinai Medical Center, Los Angeles, CA, United States.
Helen S GoodridgeDepartments of Biomedical Sciences, Pathology, Surgery and Medicine, Cedars-Sinai Medical Center, Los Angeles, CA, United States.
Fangjin HuangDepartments of Biomedical Sciences, Pathology, Surgery and Medicine, Cedars-Sinai Medical Center, Los Angeles, CA, United States.
Anne E CressMolecular and Cellular Biology, University of Arizona Cancer Center, University of Arizona, Tucson, AZ, United States.
Stephen J PandolDepartments of Biomedical Sciences, Pathology, Surgery and Medicine, Cedars-Sinai Medical Center, Los Angeles, CA, United States.
Stephen L ShiaoDepartments of Biomedical Sciences, Pathology, Surgery and Medicine, Cedars-Sinai Medical Center, Los Angeles, CA, United States.
Adriana C VidalDepartments of Biomedical Sciences, Pathology, Surgery and Medicine, Cedars-Sinai Medical Center, Los Angeles, CA, United States.
Lily WuDepartment of Molecular and Medical Pharmacology and Radiation Oncology, David Geffen School of Medicine, University of California, Los Angeles, Los Angeles, CA, United States.
Nicholas G NickolsDepartment of Molecular and Medical Pharmacology and Radiation Oncology, David Geffen School of Medicine, University of California, Los Angeles, Los Angeles, CA, United States.
Arkadiusz GertychDepartments of Biomedical Sciences, Pathology, Surgery and Medicine, Cedars-Sinai Medical Center, Los Angeles, CA, United States.
Beatrice S KnudsenDepartments of Biomedical Sciences, Pathology, Surgery and Medicine, Cedars-Sinai Medical Center, Los Angeles, CA, United States.

Funding

Targeting diet-induced promotion of Kras-initiated pancreatic adenocarcinomaP01CA163200 · NCI · UNIVERSITY OF CALIFORNIA LOS ANGELES · PI PANDOL, STEPHEN J. · 2012 to 2016
$6.2M
Racial Differences in Prostate Cancer Molecular SubtypingR01CA220327 · NCI · CEDARS-SINAI MEDICAL CENTER · PI Stephen Jay Freedland, Michael R. Freeman · 2018 to 2026
$3.1M
Qualifying Multi-Transcript Signatures for Active Surveillance of Prostate CancerR01CA182438 · NCI · CEDARS-SINAI MEDICAL CENTER · PI KIM, HYUNG L, KNUDSEN, BEATRICE S · 2014 to 2018
$2.8M
The Impact of Macrophage Polarization on the Efficacy of Radiation TherapyK08CA191139 · NCI · CEDARS-SINAI MEDICAL CENTER · PI SHIAO, STEPHEN L. · 2015 to 2019
$884k
NCI NIH HHS K08 CA191139NCI NIH HHS P01 CA163200NCI NIH HHS R01 CA182438NCI NIH HHS R01 CA220327
6 · The paper itself

Abstract

An array of phenotypically diverse myeloid cells and macrophages (MC&M) resides in the tumor microenvironment, requiring multiplexed detection systems for visualization. Here we report an automated, multiplexed staining approach, named PLEXODY, that consists of five MC&M-related fluorescently-tagged antibodies (anti - CD68, - CD163, - CD206, - CD11b, and - CD11c), and three chromogenic antibodies, reactive with high- and low-molecular weight cytokeratins and CD3, highlighting tumor regions, benign glands and T cells. The staining prototype and image analysis methods which include a pixel/area-based quantification were developed using tissues from inflamed colon and tonsil and revealed a unique tissue-specific composition of 14 MC&M-associated pixel classes. As a proof-of-principle, PLEXODY was applied to three cases of pancreatic, prostate and renal cancers. Across digital images from these cancer types we observed 10 MC&M-associated pixel classes at frequencies greater than 3%. Cases revealed higher frequencies of single positive compared to multi-color pixels and a high abundance of CD68+/CD163+ and CD68+/CD163+/CD206+ pixels. Significantly more CD68+ and CD163+ vs. CD11b+ and CD11c+ pixels were in direct contact with tumor cells and T cells. While the greatest percentage (~70%) of CD68+ and CD163+ pixels was 0-20 microns away from tumor and T cell borders, CD11b+ and CD11c+ pixels were detected up to 240 microns away from tumor/T cell masks. Together, these data demonstrate significant differences in densities and spatial organization of MC&M-associated pixel classes, but surprising similarities between the three cancer types.

Indexed as

Antigens, CDHumansImmunohistochemistryKidney NeoplasmsMacrophagesMaleMyeloid CellsPancreatic NeoplasmsProstatic NeoplasmsReproducibility of ResultsSensitivity and SpecificityStaining and LabelingT-LymphocytesTumor MicroenvironmentAntigens, CDFFPEimmunofluorescenceimmunohistochemistrymacrophagemultiplexmyeloidspatial profiling

Identifiers

PMID30619287
PMCPMC6302234

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.