Evidence map›Paper›PMID 30618570›Full record

ArticleFrontiers in neuroscience2018

GPUs Outperform Current HPC and Neuromorphic Solutions in Terms of Speed and Energy When Simulating a Highly-Connected Cortical Model.

James C Knight, Thomas Nowotny

Open access · goldAbstract read
In one paragraph

Article in Frontiers in neuroscience, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 25 papers.

0numbers the graph read from it
0cells of the map it votes in
25citing papers in PubMed
3.8field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

25 citing papers in PubMed, 94 citations in OpenAlex.

  1. Article
  2. Building on models-a perspective for computational neuroscience.Cerebral cortex (New York, N.Y. : 1991) · 2025
    Article
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  11. Connectivity concepts in neuronal network modeling.PLoS computational biology · 2022
    Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors at 1 institution in 1 country.

James C KnightCentre for Computational Neuroscience and Robotics, School of Engineering and Informatics, University of Sussex, Brighton, United Kingdom.
Thomas NowotnyCentre for Computational Neuroscience and Robotics, School of Engineering and Informatics, University of Sussex, Brighton, United Kingdom.
University of Sussex · GB

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

While neuromorphic systems may be the ultimate platform for deploying spiking neural networks (SNNs), their distributed nature and optimization for specific types of models makes them unwieldy tools for developing them. Instead, SNN models tend to be developed and simulated on computers or clusters of computers with standard von Neumann CPU architectures. Over the last decade, as well as becoming a common fixture in many workstations, NVIDIA GPU accelerators have entered the High Performance Computing field and are now used in 50 % of the Top 10 super computing sites worldwide. In this paper we use our GeNN code generator to re-implement two neo-cortex-inspired, circuit-scale, point neuron network models on GPU hardware. We verify the correctness of our GPU simulations against prior results obtained with NEST running on traditional HPC hardware and compare the performance with respect to speed and energy consumption against published data from CPU-based HPC and neuromorphic hardware. A full-scale model of a cortical column can be simulated at speeds approaching 0.5× real-time using a single NVIDIA Tesla V100 accelerator-faster than is currently possible using a CPU based cluster or the SpiNNaker neuromorphic system. In addition, we find that, across a range of GPU systems, the energy to solution as well as the energy per synaptic event of the microcircuit simulation is as much as 14× lower than either on SpiNNaker or in CPU-based simulations. Besides performance in terms of speed and energy consumption of the simulation, efficient initialization of models is also a crucial concern, particularly in a research context where repeated runs and parameter-space exploration are required. Therefore, we also introduce in this paper some of the novel parallel initialization methods implemented in the latest version of GeNN and demonstrate how they can enable further speed and energy advantages.

Indexed as

accuracy of simulationbenchmarkingcomputational neuroscienceenergy to solutionGPUhigh-performance computingparallel computingspiking neural networks

Identifiers

PMID30618570
PMCPMC6299048
OpenAlexW2904565241

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.