Evidence map›Paper›PMID 30618498›Full record

ArticleJournal of undergraduate neuroscience education : JUNE : a publication of FUN, Faculty for Undergraduate Neuroscience2018

Teaching Dose-response Relationships Through Aminoglycoside Block of Mechanotransduction Channels in Lateral Line Hair Cells of Larval Zebrafish.

Hannah Payette Peterson, Eileen L Troconis, Alexander J Ordoobadi, Stacey Thibodeau-Beganny, Josef G Trapani

Open access · greenAbstract read
In one paragraph

Article in Journal of undergraduate neuroscience education : JUNE : a publication of FUN, Faculty for Undergraduate Neuroscience, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
0.3field-weighted citation impact, top 45% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed, 2 citations in OpenAlex.

  1. Open-Ended Inquiry into Zebrafish Nerve Development Using Image Analysis.Journal of undergraduate neuroscience education : JUNE : a publication of FUN, Faculty for Undergraduate Neuroscience · 2021
    Article
  2. Modulating the Zebrafish Camouflage Response Pathway to Illustrate Neuroendocrine Control Over a Robust and Quantifiable Behavior.Journal of undergraduate neuroscience education : JUNE : a publication of FUN, Faculty for Undergraduate Neuroscience · 2019
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 1 institution in 1 country.

Hannah Payette PetersonDepartment of Biology and Neuroscience Program, Amherst College, Amherst, MA 01002 USA.
Eileen L TroconisDepartment of Biology and Neuroscience Program, Amherst College, Amherst, MA 01002 USA.
Alexander J OrdoobadiDepartment of Biology and Neuroscience Program, Amherst College, Amherst, MA 01002 USA.
Stacey Thibodeau-BegannyDepartment of Biology and Neuroscience Program, Amherst College, Amherst, MA 01002 USA.
Josef G TrapaniDepartment of Biology and Neuroscience Program, Amherst College, Amherst, MA 01002 USA.
Amherst College · US

Funding

Sensory Encoding in Hair Cells of the Zebrafish Lateral LineR15DC014843 · NIDCD · AMHERST COLLEGE · PI TRAPANI, JOSEF GEORGE · 2016 to 2016
$439k
NIDCD NIH HHS R15 DC014843
6 · The paper itself

Abstract

Here we introduce a novel set of laboratory exercises for teaching about hair cell structure and function and dose-response relationships via fluorescence microscopy. Through fluorescent labeling of lateral line hair cells, students assay aminoglycoside block of mechanoelectrical transduction (MET) channels in larval zebrafish. Students acquire and quantify images of hair cells fluorescently labeled with FM 1-43, which enters the hair cell through MET channels. Blocking FM 1-43 uptake with different concentrations of dihydrostreptomycin (DHS) results in dose-dependent reduction in hair-cell fluorescence. This method allows students to generate dose-response curves for the percent fluorescence reduction at different concentrations of DHS, which are then visualized to examine the blocking behavior of DHS using the Hill equation. Finally, students present their findings in lab reports structured as scientific papers. Together these laboratory exercises give students the opportunity to learn about hair cell mechanotransduction, pharmacological block of ion channels, and dose-dependent relationships including the Hill equation, while also exposing students to the zebrafish model organism, fluorescent labeling and microscopy, acquisition and analysis of images, and the presentation of experimental findings. These simple yet comprehensive techniques are appropriate for an undergraduate biology or neuroscience classroom laboratory.

Indexed as

DHSdihydrostreptomycindose-response curvesdrug competitionfluorescence microscopyFM 1-43hair cellslateral linemechanoelectrical transduction channelMET channelzebrafish

Identifiers

PMID30618498
PMCPMC6312140
OpenAlexW3021394864

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.