Evidence map›Paper›PMID 30617926›Full record

ArticleMarine biotechnology (New York, N.Y.)2019

Screening for Antiviral Medaka Haploid Embryonic Stem Cells by Genome Wide Mutagenesis.

Wanwan Zhang, Peng Jia, Wei Liu, Kuntong Jia, Meisheng Yi

Abstract read
PubMed Publisher
In one paragraph

Article in Marine biotechnology (New York, N.Y.), 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
0.7field-weighted citation impact, top 32% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed, 11 citations in OpenAlex.

  1. Characterizing Marine Medaka (Animals : an open access journal from MDPI · 2024
    Article
  2. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 2 institutions in 1 country.

Wanwan ZhangSchool of Marine Sciences, Sun Yat-sen University, Guangdong, China.
Peng JiaSchool of Marine Sciences, Sun Yat-sen University, Guangdong, China.
Wei LiuSchool of Marine Sciences, Sun Yat-sen University, Guangdong, China.
Kuntong JiaSchool of Marine Sciences, Sun Yat-sen University, Guangdong, China. jiakt3@mail.sysu.edu.cn.
Meisheng YiSchool of Marine Sciences, Sun Yat-sen University, Guangdong, China. yimsh@mail.sysu.edu.cn.
Sun Yat-sen University · CNKey Laboratory of Guangdong Province · CN

Funding

Fundamental Research Funds for the Central Universities 17lgpy61National Natural Science Foundation of China 31502195National Natural Science Foundation of China 31602191National Natural Science Foundation of China 3771587Natural Science Foundation of Guangdong Province 2015A030308012Pearl River S and T Nova Program of Guangzhou 201806010047Science and Technology Planning Project of Guangdong Province 2017A030303010Zhuhai Scholar Professor Program 2015
6 · The paper itself

Abstract

Nervous necrosis virus (NNV), one of the most prevalent fish pathogens, has caused significant losses in both yield and economy to the aquaculture. Host factors involved in NNV infection remain to be identified due to the lack of ideal model for the study of NNV and host interaction. Haploid stem cells have proven to be ideal materials in genetic screens. Here, we generated a cell line HX1G1 (simply named G1) with the activity against red-spotted grouper nervous necrosis virus (RGNNV) by N-ethyl-N-nitrosourea (ENU)-mediated whole genome random mutagenesis from the haploid embryonic stem cell HX1a, a cell clone from haploid cell line HX1 that we previously derived from the medaka fish. G1 cells retained the characteristics of haploidy and pluripotency as indicated by the EBs differentiation ability after genetic mutagenesis. Compared with HX1a cells, no typical cytopathic effects were observed, and the expression of RNA-dependent RNA polymerase (RDRP) was significantly reduced in G1 cells post RGNNV infection, indicating the enhanced anti-RGNNV activity of G1. Furthermore, we demonstrated that RGNNV entry into G1 cells was partially inhibited, and this inhibition might be relevant to the induced mutation of heat shock cognate protein 70 (HSC70) which was decisive for NNV entry. Interestingly, G1 cells were to some extent permissive to RGNNV infection, but RGNNV was spontaneously cleared in G1 cells during serial passage. In addition, we also found that the expression levels of interferon (IFN)-related genes were higher in G1 cells than those in HX1a cells, suggesting that viral clearance might be associated with the elevated expression of IFN-related genes in G1 cells.

Indexed as

Embryonic Stem CellsMutagenesisAnimalsAquacultureCell LineEthylnitrosoureaFish DiseasesGene ExpressionHaploidyHost Microbial InteractionsInterferonsNodaviridaeOryziasRNA-Dependent RNA PolymeraseRNA Virus InfectionsEthylnitrosoureaInterferonsRNA-Dependent RNA PolymeraseAntiviral activityHaploid embryonic stem cellsN-ethyl-N-nitrosoureaRed-spotted grouper nervous necrosis virus

Identifiers

PMID30617926
OpenAlexW2910733536

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.