Evidence map›Paper›PMID 30617255›Full record

ArticleNature genetics2019

GADD45A binds R-loops and recruits TET1 to CpG island promoters.

Khelifa Arab, Emil Karaulanov, Michael Musheev, Philipp Trnka, Andrea Schäfer, Ingrid Grummt, Christof Niehrs

Abstract read
In one paragraph

Article in Nature genetics, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 163 papers, 2 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
163citing papers in PubMed, 2 pooled it
10.5field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

163 citing papers in PubMed, 2 syntheses or guidelines pooled it, 350 citations in OpenAlex.

  1. Pooled it
  2. Pooled it
  3. Trial
  4. Article
  5. Review
  6. Review
  7. Article
  8. Article
  9. Review
  10. Article
  11. Review
  12. Article
  13. Review
  14. Article
  15. Article
  16. Review
  17. Article
  18. Rewiring cancer epigenome: lncRNA as modulator of chromatin architecture and neoplastic transformation.Mammalian genome : official journal of the International Mammalian Genome Society · 2025
    Review
  19. Review
  20. Article

103 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 1 country.

Khelifa ArabInstitute of Molecular Biology (IMB), Mainz, Germany. k.arab@imb-mainz.de.ORCID http://orcid.org/0000-0001-9197-035X
Emil KaraulanovInstitute of Molecular Biology (IMB), Mainz, Germany.
Michael MusheevInstitute of Molecular Biology (IMB), Mainz, Germany.
Philipp TrnkaInstitute of Molecular Biology (IMB), Mainz, Germany.
Andrea SchäferInstitute of Molecular Biology (IMB), Mainz, Germany.
Ingrid GrummtDivision of Molecular Biology of the Cell II, German Cancer Research Center and DKFZ-ZMBH Alliance, Heidelberg, Germany. i.grummt@dkfz.de.ORCID http://orcid.org/0000-0002-0846-8498
Christof NiehrsInstitute of Molecular Biology (IMB), Mainz, Germany. c.niehrs@imb-mainz.de.ORCID http://orcid.org/0000-0002-9561-9302
Institute of Molecular Biology · DEGerman Cancer Research Center · DE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

R-loops are DNA-RNA hybrids enriched at CpG islands (CGIs) that can regulate chromatin states

Indexed as

AnimalsCell CycleCell Cycle ProteinsCell LineChromatinCpG IslandsDNA-Binding ProteinsDNA MethylationEpigenesis, GeneticEpigenomicsGADD45 ProteinsHEK293 CellsHumansMiceMixed Function OxygenasesNuclear ProteinsCell Cycle ProteinsChromatinDNA-Binding ProteinsGADD45A protein, humanGADD45 ProteinsMixed Function OxygenasesNuclear ProteinsProto-Oncogene ProteinsRibonuclease Hribonuclease HIRNA, Long NoncodingTET1 protein, human

Identifiers

PMID30617255
PMCPMC6420098
OpenAlexW2906567604

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.