Evidence map›Paper›PMID 30616642›Full record

ArticleEpigenetics & chromatin2019

Chromatin changes in Anopheles gambiae induced by Plasmodium falciparum infection.

José L Ruiz, Rakiswendé S Yerbanga, Thierry Lefèvre, Jean B Ouedraogo, Victor G Corces, Elena Gómez-Díaz

Open access · goldAbstract read
In one paragraph

Article in Epigenetics & chromatin, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 34 papers.

0numbers the graph read from it
0cells of the map it votes in
34citing papers in PubMed
2.5field-weighted citation impact, top 10% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

34 citing papers in PubMed, 52 citations in OpenAlex.

  1. Article
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  5. Altered histone modifications inbioRxiv : the preprint server for biology · 2025
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  10. Mechanisms of transcriptional regulation inProceedings. Biological sciences · 2024
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  14. Mechanisms of transcriptional regulation inbioRxiv : the preprint server for biology · 2023
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 4 institutions in 4 countries.

José L RuizEstación Biológica de Doñana (EBD), Consejo Superior de Investigaciones Científicas, 41092, Seville, Spain.
Rakiswendé S YerbangaInstitut de Recherche en Sciences de la Santé (IRSS), 01 BP 171, Bobo Dioulasso, Burkina Faso.
Thierry LefèvreInstitut de Recherche en Sciences de la Santé (IRSS), 01 BP 171, Bobo Dioulasso, Burkina Faso.
Jean B OuedraogoInstitut de Recherche en Sciences de la Santé (IRSS), 01 BP 171, Bobo Dioulasso, Burkina Faso.
Victor G CorcesDepartment of Biology, Emory University, 1510 Clifton Road NE, Atlanta, GA, 30322, USA.
Elena Gómez-DíazEstación Biológica de Doñana (EBD), Consejo Superior de Investigaciones Científicas, 41092, Seville, Spain. elena.gomez@csic.es.ORCID 0000-0002-4146-9003
Consejo Superior de Investigaciones Científicas · ESInstitut de Recherche en Sciences de la Santé · BFCentre National de la Recherche Scientifique · FREmory University · US

Funding

MOLECULAR BASIS OF SUPPRESSION IN DROSOPHILAR01GM035463 · NIGMS · JOHNS HOPKINS UNIVERSITY · PI CORCES, VICTOR G. · 1986 to 2020
$10.7M
NIGMS NIH HHS R01 GM035463NIH HHS R01GM035463
6 · The paper itself

Abstract

backgroundInfection by the human malaria parasite leads to important changes in mosquito phenotypic traits related to vector competence. However, we still lack a clear understanding of the underlying mechanisms and, in particular, of the epigenetic basis for these changes. We have examined genome-wide distribution maps of H3K27ac, H3K9ac, H3K9me3 and H3K4me3 by ChIP-seq and the transcriptome by RNA-seq, of midguts from Anopheles gambiae mosquitoes blood-fed uninfected and infected with natural isolates of the human malaria parasite Plasmodium falciparum in Burkina Faso.

resultsWe report 15,916 regions containing differential histone modification enrichment between infected and uninfected, of which 8339 locate at promoters and/or intersect with genes. The functional annotation of these regions allowed us to identify infection-responsive genes showing differential enrichment in various histone modifications, such as CLIP proteases, antimicrobial peptides-encoding genes, and genes related to melanization responses and the complement system. Further, the motif analysis of regions differentially enriched in various histone modifications predicts binding sites that might be involved in the cis-regulation of these regions, such as Deaf1, Pangolin and Dorsal transcription factors (TFs). Some of these TFs are known to regulate immunity gene expression in Drosophila and are involved in the Notch and JAK/STAT signaling pathways.

conclusionsThe analysis of malaria infection-induced chromatin changes in mosquitoes is important not only to identify regulatory elements and genes underlying mosquito responses to P. falciparum infection, but also for possible applications to the genetic manipulation of mosquitoes and to other mosquito-borne systems.

Indexed as

Histone CodeAnimalsAnophelesChromatinHistonesInsect ProteinsPlasmodium falciparumChromatinHistonesInsect ProteinsChIP-seqEpigenomeGene regulationHistone modificationsHuman malariaMosquitoesRNA-seqTranscriptome

Identifiers

PMID30616642
PMCPMC6322293
OpenAlexW2911963282

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.