Evidence map›Paper›PMID 30614796›Full record

ArticleCancer biomarkers : section A of Disease markers2019

Gene expression profiling identifies potential molecular markers of papillary thyroid carcinoma.

Ismael Reyes, Niradiz Reyes, Robert Suriano, Codrin Iacob, Nina Suslina, Anthony Policastro, Augustine Moscatello, Stimson Schantz, Raj K Tiwari, Jan Geliebter

Abstract read
In one paragraph

Article in Cancer biomarkers : section A of Disease markers, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 24 papers.

0numbers the graph read from it
0cells of the map it votes in
24citing papers in PubMed
4.2field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

24 citing papers in PubMed, 34 citations in OpenAlex.

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  10. The Role of Lipid Metabolism Disorders in the Development of Thyroid Cancer.International journal of molecular sciences · 2024
    Review
  11. Review
  12. Article
  13. Article
  14. Review
  15. Article
  16. Downregulation of Rap1GAP Expression Activates the TGF-BioMed research international · 2021
    Article
  17. Article
  18. Article
  19. Article
  20. Heparan Sulfate Proteoglycan Signaling in Tumor Microenvironment.International journal of molecular sciences · 2020
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 3 institutions in 2 countries.

Ismael ReyesDepartment of Microbiology and Immunology, New York Medical College, Valhalla, NY, USA.
Niradiz ReyesDepartment of Microbiology and Immunology, New York Medical College, Valhalla, NY, USA.
Robert SurianoCollege of Mount Saint Vincent, Bronx, NY, USA.
Codrin IacobNew York Eye and Ear Infirmary, New York, NY, USA.
Nina SuslinaNew York Eye and Ear Infirmary, New York, NY, USA.
Anthony PolicastroDepartment of Microbiology and Immunology, New York Medical College, Valhalla, NY, USA.
Augustine MoscatelloDepartment of Microbiology and Immunology, New York Medical College, Valhalla, NY, USA.
Stimson SchantzNew York Eye and Ear Infirmary, New York, NY, USA.
Raj K TiwariDepartment of Microbiology and Immunology, New York Medical College, Valhalla, NY, USA.
Jan GeliebterDepartment of Microbiology and Immunology, New York Medical College, Valhalla, NY, USA.
New York Medical College · USNew York Eye and Ear Infirmary · USCollege of Mount Saint Vincent · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundThyroid cancer is the most common endocrine malignancy worldwide, with the predominant form papillary thyroid carcinoma (PTC) representing approximately 80% of cases.

objectiveThis study was addressed to identify potential genes and pathways involved in the pathogenesis of PTC and potential novel biomarkers for this disease.

methodsGene expression profiling was carried out by DNA microarray technology. Validation of microarray data by qRT-PCR, western blot, and enzyme linked immunosorbent assay was also performed in a selected set of genes and gene products, with the potential to be used as diagnostic or prognostic biomarkers, such as those associated with cell adhesion, extracellular matrix (ECM) remodeling and immune/inflammatory response.

resultsIn this study we found that upregulation of extracellular activities, such as proteoglycans, ECM-receptor interaction, and cell adhesion molecules, were the most prominent feature of PTC. Significantly over-expressed genes included SDC1 (syndecan 1), SDC4 (syndecan 4), KLK7 (kallikrein-related peptidase 7), KLK10 (kallikrein-related peptidase 10), SLPI (secretory leukocyte peptidase inhibitor), GDF15 (growth/differentiation factor-15), ALOX5 (arachidonate 5-lipoxygenase), SFRP2 (secreted Frizzled-related protein 2), among others. Further, elevated KLK10 levels were detected in patients with PTC. Many of these genes belong to KEGG pathway "Proteoglycans in cancer".

conclusionsUsing DNA microarray analysis allowed the identification of genes and pathways with known important roles in malignant transformation, and also the discovery of novel genes that may be potential biomarkers for PTC.

Indexed as

Biomarkers, TumorGene Expression ProfilingGene Expression Regulation, NeoplasticTranscriptomeAdultAgedFemaleHumansMaleMiddle AgedNeoplasm StagingThyroid Cancer, PapillaryThyroid NeoplasmsYoung AdultBiomarkers, TumorBiological Markersgene expressionkallikrein-related peptidasethyroid carcinoma

Identifiers

PMID30614796
PMCPMC13082499
OpenAlexW2907241436

What OpenQuestion holds

Textmetadata
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.