Evidence map›Paper›PMID 30612542›Full record

ArticleBMC plant biology2019

SNP genotyping elucidates the genetic diversity of Magna Graecia grapevine germplasm and its historical origin and dissemination.

Gabriella De Lorenzis, Francesco Mercati, Carlo Bergamini, Maria Francesca Cardone, Antonio Lupini, Antonio Mauceri, Angelo Raffaele Caputo, Loredana Abbate, Maria Gabriella Barbagallo, Donato Antonacci and 2 more

Erratum issuedAbstract readHistorical Article
In one paragraph

Article in BMC plant biology, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 31 papers.

0numbers the graph read from it
0cells of the map it votes in
31citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

31 citing papers in PubMed.

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  13. A high-density integrated map for grapevine based on three mapping populations genotyped by the Vitis18K SNP chip.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2022
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  19. Back to the Origins: Background and Perspectives of Grapevine Domestication.International journal of molecular sciences · 2021
    Review
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4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

12 authors.

Gabriella De LorenzisDipartimento di Scienze Agrarie ed Ambientali, via Celoria 2, 20133, Milan, Italy.
Francesco MercatiIstituto di Bioscienze e Biorisorse CNR, Corso Calatafimi 414, 90120, Palermo, Italy.
Carlo BergaminiConsiglio per la ricerca in agricoltura e l'analisi dell'economia agraria, Centro di ricerca Viticoltura ed Enologia, CREA-VE, via Casamassima 148, 70010, Turi, Bari, Italy.
Maria Francesca CardoneConsiglio per la ricerca in agricoltura e l'analisi dell'economia agraria, Centro di ricerca Viticoltura ed Enologia, CREA-VE, via Casamassima 148, 70010, Turi, Bari, Italy.
Antonio LupiniDipartimento AGRARIA, località Feo di Vito snc, 89121, Reggio Calabria, Italy.
Antonio MauceriDipartimento AGRARIA, località Feo di Vito snc, 89121, Reggio Calabria, Italy.
Angelo Raffaele CaputoConsiglio per la ricerca in agricoltura e l'analisi dell'economia agraria, Centro di ricerca Viticoltura ed Enologia, CREA-VE, via Casamassima 148, 70010, Turi, Bari, Italy.
Loredana AbbateIstituto di Bioscienze e Biorisorse CNR, Corso Calatafimi 414, 90120, Palermo, Italy.
Maria Gabriella BarbagalloDipartimento di Scienze Agrarie, Alimentari e Forestali, viale delle Scienze 11, 90128, Palermo, Italy.
Donato AntonacciConsiglio per la ricerca in agricoltura e l'analisi dell'economia agraria, Centro di ricerca Viticoltura ed Enologia, CREA-VE, via Casamassima 148, 70010, Turi, Bari, Italy.
Francesco SunseriDipartimento AGRARIA, località Feo di Vito snc, 89121, Reggio Calabria, Italy. francesco.sunseri@unirc.it.
Lucio BrancadoroDipartimento di Scienze Agrarie ed Ambientali, via Celoria 2, 20133, Milan, Italy. lucio.brancadoro@unimi.it.ORCID http://orcid.org/0000-0003-3669-8132

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundMagna Graecia is the ancient name for the modern geopolitical region of South Italy extensively populated by Greek colonizers, shown by archeological and historical evidence to be the oldest wine growing region of Italy, crucial for the spread of specialized viticulture around Mediterranean shores. Here, the genetic diversity of Magna Graecia grape germplasm was assessed and its role in grapevine propagation around the Mediterranean basin was underlined.

resultsA large collection of grapevines from Magna Graecia was compared with germplasm from Georgia to the Iberian Peninsula using the 18 K SNP array. A high level of genetic diversity of the analyzed germplasm was determined; clustering, structure analysis and DAPC (Discriminant Analysis of Principal Components) highlighted the genetic relationships among genotypes from South Italy and the Eastern Mediterranean (Greece). Gene flow from east (Georgia) to west (Iberian Peninsula) was identified throughout the large number of detected admixed samples. Pedigree analysis showed a complex and well-structured network of first degree relationships, where the cultivars from Magna Graecia were mainly involved.

conclusionsThis study provided evidence that Magna Graecia germplasm was shaped by historical events that occurred in the area due to the robust link between South Italian and Greek genotypes, as well as, by the availability of different thermal resources for cultivars growing in such different winegrowing areas. The uniqueness of this ampelographic platform was mainly an outcome of complex natural or human-driven crosses involving elite cultivars.

Indexed as

Crop ProductionDNA, PlantGenetic VariationGenotypeGenotyping TechniquesGeorgia (Republic)GreeceHistory, AncientItalyMediterranean RegionPedigreePolymorphism, Single NucleotideSpainVitisDNA, PlantGenetic diversityMolecular markersParentageSecondary center of domesticationSNP

Identifiers

PMID30612542
PMCPMC6322315

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.